RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 TRBV5-5A0A0J9YX44 114 aa18.94■□□□□ 0.62
C9orf3-215ENST00000478473 GABRPO00591 440 aa18.94■□□□□ 0.62
C9orf3-215ENST00000478473 ARG1P05089 322 aa18.94■□□□□ 0.62
C9orf3-215ENST00000478473 MED21Q13503 144 aa18.94■□□□□ 0.62
C9orf3-215ENST00000478473 HEPN1Q6WQI6 88 aa18.94■□□□□ 0.62
C9orf3-215ENST00000478473 TMEM133Q9H2Q1 129 aa18.94■□□□□ 0.62
C9orf3-215ENST00000478473 PPA2Q9H2U2 334 aa18.94■□□□□ 0.62
C9orf3-215ENST00000478473 IGHV2-26A0A0B4J1V2 119 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 MEX3AA1L020 520 aaKnown RBP18.93■□□□□ 0.62
C9orf3-215ENST00000478473 EFCAB10A6NFE3 127 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 GNAO1P09471 354 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 SOX2P48431 317 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 SNU13P55769 128 aaKnown RBP18.93■□□□□ 0.62
C9orf3-215ENST00000478473 RPS11P62280 158 aaKnown RBP eCLIP18.93■□□□□ 0.62
C9orf3-215ENST00000478473 ST3GAL4Q11206 333 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 IL13RA2Q14627 380 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 C11orf88Q6PI97 169 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 BRICD5Q6PL45 260 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 TREML4Q6UXN2 200 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 DTX3Q8N9I9 347 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 COQ2Q96H96 371 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 GAL3ST2Q9H3Q3 398 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 TMEM138Q9NPI0 162 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 TAS2R4Q9NYW5 299 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 IL36GQ9NZH8 169 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 PSORS1C1Q9UIG5 152 aa18.93■□□□□ 0.62
C9orf3-215ENST00000478473 TRGV10A0A0A0MS01 117 aa18.92■□□□□ 0.62
C9orf3-215ENST00000478473 ODAMA1E959 279 aa18.92■□□□□ 0.62
C9orf3-215ENST00000478473 MAGEB3O15480 346 aa18.92■□□□□ 0.62
C9orf3-215ENST00000478473 ZNF44P15621 663 aa18.92■□□□□ 0.62
C9orf3-215ENST00000478473 IGFBP3P17936 291 aaPredicted RBP18.92■□□□□ 0.62
C9orf3-215ENST00000478473 PAX6P26367 422 aa18.92■□□□□ 0.62
C9orf3-215ENST00000478473 CD34P28906 385 aa18.92■□□□□ 0.62
C9orf3-215ENST00000478473 GLIPR1P48060 266 aa18.92■□□□□ 0.62
C9orf3-215ENST00000478473 YIF1BQ5BJH7 314 aa18.92■□□□□ 0.62
C9orf3-215ENST00000478473 NHLRC3Q5JS37 347 aa18.92■□□□□ 0.62
C9orf3-215ENST00000478473 OR52W1Q6IF63 320 aa18.92■□□□□ 0.62
C9orf3-215ENST00000478473 C8orf59Q8N0T1 100 aaPredicted RBP18.92■□□□□ 0.62
C9orf3-215ENST00000478473 GHSRQ92847 366 aa18.92■□□□□ 0.62
C9orf3-215ENST00000478473 PGLYRP3Q96LB9 341 aa18.92■□□□□ 0.62
C9orf3-215ENST00000478473 CHCHD3Q9NX63 227 aaKnown RBP18.92■□□□□ 0.62
C9orf3-215ENST00000478473 MEGF8Q7Z7M0 2845 aa18.92■□□□□ 0.62
C9orf3-215ENST00000478473 VWFP04275 2813 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 A0A087X0M5 115 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 A0A1B0GX30 115 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 TIMM23O14925 209 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 DEGS1O15121 323 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 MMP23AO75900 390 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 CD1AP06126 327 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 CGB3P0DN86 165 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 CGB7P0DN87 165 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 PTGFRP43088 359 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 EFNB2P52799 333 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 AESQ08117 197 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 RTN4RL2Q86UN3 420 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 TNFAIP8L1Q8WVP5 186 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 TFAP2CQ92754 450 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 CLEC7AQ9BXN2 247 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 IFT22Q9H7X7 185 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 DCLRE1BQ9H816 532 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 LINC00574Q9H8X3 128 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 FKBP14Q9NWM8 211 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 TCF19Q9Y242 345 aa18.91■□□□□ 0.62
C9orf3-215ENST00000478473 WNK1Q9H4A3 2382 aa18.9■□□□□ 0.62
C9orf3-215ENST00000478473 TRAV24A0A0B4J272 114 aa18.9■□□□□ 0.62
C9orf3-215ENST00000478473 A6NDX4 124 aa18.9■□□□□ 0.62
C9orf3-215ENST00000478473 CHST1O43916 411 aa18.9■□□□□ 0.62
C9orf3-215ENST00000478473 IGLV1-47P01700 117 aa18.9■□□□□ 0.62
C9orf3-215ENST00000478473 KCNJ3P48549 501 aa18.9■□□□□ 0.62
C9orf3-215ENST00000478473 TAS2R43P59537 309 aa18.9■□□□□ 0.62
C9orf3-215ENST00000478473 LY6EQ16553 131 aa18.9■□□□□ 0.62
C9orf3-215ENST00000478473 Q8N2B8 174 aa18.9■□□□□ 0.62
C9orf3-215ENST00000478473 OR4P4Q8NGL7 312 aa18.9■□□□□ 0.62
C9orf3-215ENST00000478473 FAM90A22PA8MWA6 464 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 H0YJX3 145 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 FSTP19883 344 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 GABRA5P31644 462 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 PPP3R1P63098 170 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 BDH1Q02338 343 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 SSX2Q16385 188 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 Q499Y3 187 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 KRBOX4Q5JUW0 171 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 TRAPPC6BQ86SZ2 158 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 OR4C13Q8NGP0 309 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 GPER1Q99527 375 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 NPFFR1Q9GZQ6 430 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 OR6C3Q9NZP0 311 aa18.89■□□□□ 0.61
C9orf3-215ENST00000478473 TRBV5-7A0A0A0MS05 114 aa18.88■□□□□ 0.61
C9orf3-215ENST00000478473 ZNF729A6NN14 1252 aaPredicted RBP18.88■□□□□ 0.61
C9orf3-215ENST00000478473 XPNPEP2O43895 674 aa18.88■□□□□ 0.61
C9orf3-215ENST00000478473 CDK2P24941 298 aa18.88■□□□□ 0.61
C9orf3-215ENST00000478473 BDKRB2P30411 391 aa18.88■□□□□ 0.61
C9orf3-215ENST00000478473 C17orf58Q2M2W7 97 aa18.88■□□□□ 0.61
C9orf3-215ENST00000478473 RNLSQ5VYX0 342 aa18.88■□□□□ 0.61
C9orf3-215ENST00000478473 CCBE1Q6UXH8 406 aaPredicted RBP18.88■□□□□ 0.61
C9orf3-215ENST00000478473 PITPNC1Q9UKF7 332 aa18.88■□□□□ 0.61
C9orf3-215ENST00000478473 KIAA2026Q5HYC2 2103 aa18.88■□□□□ 0.61
C9orf3-215ENST00000478473 M0QZ24 198 aa18.87■□□□□ 0.61
C9orf3-215ENST00000478473 HTR1DP28221 377 aa18.87■□□□□ 0.61
C9orf3-215ENST00000478473 ZNF93P35789 620 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms