RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CDK5Q00535 292 aa15.81■□□□□ 0.12
PDLIM1-202ENST00000477757 AESQ08117 197 aa15.81■□□□□ 0.12
PDLIM1-202ENST00000477757 FAM27D1Q5T7N8 215 aa15.81■□□□□ 0.12
PDLIM1-202ENST00000477757 OR8H3Q8N146 312 aa15.81■□□□□ 0.12
PDLIM1-202ENST00000477757 KIRREL1Q96J84 757 aa15.81■□□□□ 0.12
PDLIM1-202ENST00000477757 APOL4Q9BPW4 351 aa15.81■□□□□ 0.12
PDLIM1-202ENST00000477757 EXOSC4Q9NPD3 245 aaKnown RBP15.81■□□□□ 0.12
PDLIM1-202ENST00000477757 SNX5Q9Y5X3 404 aa15.81■□□□□ 0.12
PDLIM1-202ENST00000477757 TCRBV5S2A0A599 114 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 OR2H2O95918 312 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 CSN2P05814 226 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 NFYBP25208 207 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 RAB7AP51149 207 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 CFHR3Q02985 330 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 MADCAM1Q13477 382 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 GK3PQ14409 553 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 C17orf58Q2M2W7 97 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 SPATS1Q496A3 300 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 ZNF322Q6U7Q0 402 aaPredicted RBP15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 PLEKHG7Q6ZR37 379 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 TGIF2LXQ8IUE1 241 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 GIPC3Q8TF64 312 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 COQ2Q96H96 371 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 TM2D3Q9BRN9 247 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 ACTR3BQ9P1U1 418 aa15.8■□□□□ 0.12
PDLIM1-202ENST00000477757 HERC2O95714 4834 aa15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 J3QR06 171 aa15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 SH2D1BO14796 132 aa15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 CYB5AP00167 134 aa15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 IGHG4P01861 327 aa15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 CALCBP10092 127 aa15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 DIAPH2-AS1Q14236 149 aa15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 C16orf89Q6UX73 402 aa15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 OR11H1Q8NG94 326 aa15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 RNFT2Q96EX2 444 aa15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 CNN2Q99439 309 aaKnown RBP15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 ABCG5Q9H222 651 aa15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 HMG20AQ9NP66 347 aa15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 ISYNA1Q9NPH2 558 aa15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 LIN7CQ9NUP9 197 aaKnown RBP15.79■□□□□ 0.12
PDLIM1-202ENST00000477757 KBTBD11-OT1A0A1B0GTJ5 212 aa15.78■□□□□ 0.12
PDLIM1-202ENST00000477757 MAGEB4O15481 346 aaPredicted RBP15.78■□□□□ 0.12
PDLIM1-202ENST00000477757 OR8U8P0C7N1 319 aa15.78■□□□□ 0.12
PDLIM1-202ENST00000477757 POU3F4P49335 361 aa15.78■□□□□ 0.12
PDLIM1-202ENST00000477757 RBP2P50120 134 aa15.78■□□□□ 0.12
PDLIM1-202ENST00000477757 CXCR4P61073 352 aa15.78■□□□□ 0.12
PDLIM1-202ENST00000477757 ACTR3P61158 418 aa15.78■□□□□ 0.12
PDLIM1-202ENST00000477757 EBI3Q14213 229 aa15.78■□□□□ 0.12
PDLIM1-202ENST00000477757 ZNF429Q86V71 674 aa15.78■□□□□ 0.12
PDLIM1-202ENST00000477757 DNAAF1Q8NEP3 725 aa15.78■□□□□ 0.12
PDLIM1-202ENST00000477757 MRM2Q9UI43 246 aaKnown RBP15.78■□□□□ 0.12
PDLIM1-202ENST00000477757 ALMS1Q8TCU4 4167 aa15.77■□□□□ 0.12
PDLIM1-202ENST00000477757 SYT7O43581 403 aa15.77■□□□□ 0.12
PDLIM1-202ENST00000477757 RRP9O43818 475 aaKnown RBP15.77■□□□□ 0.12
PDLIM1-202ENST00000477757 OSMP13725 252 aa15.77■□□□□ 0.12
PDLIM1-202ENST00000477757 KRBOX4Q5JUW0 171 aa15.77■□□□□ 0.12
PDLIM1-202ENST00000477757 ASPHD1Q5U4P2 390 aa15.77■□□□□ 0.12
PDLIM1-202ENST00000477757 MYOZ3Q8TDC0 251 aa15.77■□□□□ 0.12
PDLIM1-202ENST00000477757 COMMD4Q9H0A8 199 aa15.77■□□□□ 0.12
PDLIM1-202ENST00000477757 SLC25A19Q9HC21 320 aa15.77■□□□□ 0.12
PDLIM1-202ENST00000477757 OR6C3Q9NZP0 311 aa15.77■□□□□ 0.12
PDLIM1-202ENST00000477757 GSTK1Q9Y2Q3 226 aa15.77■□□□□ 0.12
PDLIM1-202ENST00000477757 H3BSH0 61 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 JTBO76095 146 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 SERPINA3P01011 423 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 PSMB8P28062 276 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 VEGFCP49767 419 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 ATP1B3P54709 279 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 ODF4Q2M2E3 257 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 IZUMO1Q8IYV9 350 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 Q8N6K4 173 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 Q8N9W7 124 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 HAVCR2Q8TDQ0 301 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 LEAP2Q969E1 77 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 MNTQ99583 582 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 TEX12Q9BXU0 123 aa15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 PPIL3Q9H2H8 161 aaKnown RBP15.76■□□□□ 0.11
PDLIM1-202ENST00000477757 NCBP2LA6PVI3 153 aaKnown RBP15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 SASH3O75995 380 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 IGHV3-7P01780 117 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 CGB3P0DN86 165 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 CGB7P0DN87 165 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 SPNP16150 400 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 ATXN7L3Q14CW9 347 aaPredicted RBP15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 FAM98BQ52LJ0 330 aaKnown RBP15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 TMEM236Q5W0B7 351 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 SLC35F2Q8IXU6 374 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 CHST4Q8NCG5 386 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 CCDC54Q8NEL0 328 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 PP6455Q8WZ26 134 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 C10orf35Q96D05 121 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 EAF1Q96JC9 268 aaPredicted RBP15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 ING3Q9NXR8 418 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 CALYQ9NYX4 217 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 PSG11Q9UQ72 335 aa15.75■□□□□ 0.11
PDLIM1-202ENST00000477757 TRIM64CA6NLI5 447 aa15.74■□□□□ 0.11
PDLIM1-202ENST00000477757 HSD17B6O14756 317 aa15.74■□□□□ 0.11
PDLIM1-202ENST00000477757 LDLRAD4O15165 306 aa15.74■□□□□ 0.11
PDLIM1-202ENST00000477757 GP9P14770 177 aa15.74■□□□□ 0.11
PDLIM1-202ENST00000477757 ZNF44P15621 663 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms