RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 DOCK11Q5JSL3 2073 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 IGKV1-27A0A075B6S5 117 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 TRAV8-7A0A075B6U6 113 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 A0A1W2PQ09 198 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 A0A1W2PRD5 423 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 A0A1W2PRF3 423 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 A0A1W2PRM7 423 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 IFITM5A6NNB3 132 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 F8VVB4 439 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 F8VWA3 439 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 CTDSP2O14595 271 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 SIGLEC5O15389 551 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 HOXA3O43365 443 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-221ENST00000477561 ALX3O95076 343 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 NXPH2O95156 264 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 ALDOBP05062 364 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 OCMP0CE72 109 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-221ENST00000477561 PGA5P0DJD9 388 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 CALCBP10092 127 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 PRTN3P24158 256 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 CFPP27918 469 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 BDKRB2P30411 391 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 PRDX2P32119 198 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 ETV6P41212 452 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 FUT6P51993 359 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 PDCD1Q15116 288 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 SLC9A3R2Q15599 337 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 C9orf139Q6ZV77 190 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 NR2C2APQ86WQ0 139 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 CDH26Q8IXH8 852 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 BORCS5Q969J3 196 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 SLAMF9Q96A28 289 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 ORAI1Q96D31 301 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 ADAT3Q96EY9 351 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-221ENST00000477561 BORCS8Q96FH0 119 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 CPNE2Q96FN4 548 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-221ENST00000477561 TMEM138Q9NPI0 162 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 AKIP1Q9NQ31 210 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 RASL12Q9NYN1 266 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 ETV7Q9Y603 341 aa6.81□□□□□ -1.32
HDAC6-221ENST00000477561 IGHV1-69DA0A0B4J2H0 117 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 IGKV1-9A0A0C4DH69 117 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 TMEM89A2RUT3 159 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 FAM25AB3EWG3 89 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 FAM25CB3EWG5 89 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 FAM25GB3EWG6 89 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 SLC17A2O00624 439 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 SULT1B1O43704 296 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 NOS1APO75052 506 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-221ENST00000477561 IGHV1-69P01742 117 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 ATF1P18846 271 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 CD40LGP29965 261 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 TNFSF8P32971 234 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 TALDO1P37837 337 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 KLRD1Q13241 179 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 DCTN2Q13561 401 aaKnown RBP6.8□□□□□ -1.32
HDAC6-221ENST00000477561 CNN3Q15417 329 aaKnown RBP6.8□□□□□ -1.32
HDAC6-221ENST00000477561 RAB11BQ15907 218 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 SMIM21Q3B7S5 101 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 C11orf91Q3C1V1 193 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 HES5Q5TA89 166 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 ZNF529Q6P280 563 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 METAP1DQ6UB28 335 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-221ENST00000477561 SLC25A26Q70HW3 274 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 UTS2BQ765I0 119 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 RNF144BQ7Z419 303 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 CCDC190Q86UF4 302 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 LAX1Q8IWV1 398 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 CMTM4Q8IZR5 234 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 FAM185AQ8N0U4 392 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 PNKDQ8N490 385 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 Q8N7P7 452 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 OR4M1Q8NGD0 313 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 OR6M1Q8NGM8 313 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 OR13C9Q8NGT0 318 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 RFT1Q96AA3 541 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 SDSLQ96GA7 329 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 DIRAS2Q96HU8 199 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 NRIP2Q9BQI9 281 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 UQCC2Q9BRT2 126 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 PKIBQ9C010 78 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 CHST5Q9GZS9 411 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 PALMDQ9NP74 551 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 MTCH1Q9NZJ7 389 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 RABL2AQ9UBK7 228 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-221ENST00000477561 STEAP1Q9UHE8 339 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 SPATA2Q9UM82 520 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 RABL2BQ9UNT1 228 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 POLDIP2Q9Y2S7 368 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 KPTNQ9Y664 436 aa6.8□□□□□ -1.32
HDAC6-221ENST00000477561 TENM1Q9UKZ4 2725 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 A0A0U1RQK1 487 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 MEX3AA1L020 520 aaKnown RBP6.79□□□□□ -1.32
HDAC6-221ENST00000477561 FABP12A6NFH5 140 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 RNASEK-C17orf49H0YIS7 233 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 SPRY1O43609 319 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-221ENST00000477561 HPGDSO60760 199 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 APOA1P02647 267 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 RNASE1P07998 156 aaKnown RBP6.79□□□□□ -1.32
HDAC6-221ENST00000477561 HCKP08631 526 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms