RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 GDF3Q9NR23 364 aa2□□□□□ -2.09
XRN1-211ENST00000477237 FBXO6Q9NRD1 293 aaPredicted RBP2□□□□□ -2.09
XRN1-211ENST00000477237 DMAC2Q9NW81 257 aa2□□□□□ -2.09
XRN1-211ENST00000477237 RBFOX1Q9NWB1 397 aaKnown RBP2□□□□□ -2.09
XRN1-211ENST00000477237 FBXL12Q9NXK8 326 aa2□□□□□ -2.09
XRN1-211ENST00000477237 TAS2R16Q9NYV7 291 aa2□□□□□ -2.09
XRN1-211ENST00000477237 IDI2-AS1Q9NZ38 188 aa2□□□□□ -2.09
XRN1-211ENST00000477237 ARMCX1Q9P291 453 aa2□□□□□ -2.09
XRN1-211ENST00000477237 GALPQ9UBC7 116 aa2□□□□□ -2.09
XRN1-211ENST00000477237 OPTCQ9UBM4 332 aa2□□□□□ -2.09
XRN1-211ENST00000477237 PRO0628Q9UI54 55 aa2□□□□□ -2.09
XRN1-211ENST00000477237 HSPB8Q9UJY1 196 aa2□□□□□ -2.09
XRN1-211ENST00000477237 ABT1Q9ULW3 272 aaKnown RBP2□□□□□ -2.09
XRN1-211ENST00000477237 TNFSF18Q9UNG2 199 aa2□□□□□ -2.09
XRN1-211ENST00000477237 TP53TG1Q9Y2A0 90 aa2□□□□□ -2.09
XRN1-211ENST00000477237 RCL1Q9Y2P8 373 aaKnown RBP2□□□□□ -2.09
XRN1-211ENST00000477237 AK6Q9Y3D8 172 aaKnown RBP2□□□□□ -2.09
XRN1-211ENST00000477237 WSB1Q9Y6I7 421 aa2□□□□□ -2.09
XRN1-211ENST00000477237 LTN1O94822 1766 aa2□□□□□ -2.09
XRN1-211ENST00000477237 ATP7BP35670 1465 aa2□□□□□ -2.09
XRN1-211ENST00000477237 ERVK-7P63135 1459 aa2□□□□□ -2.09
XRN1-211ENST00000477237 NEO1Q92859 1461 aa2□□□□□ -2.09
XRN1-211ENST00000477237 RIC1Q4ADV7 1423 aa2□□□□□ -2.09
XRN1-211ENST00000477237 MYH1P12882 1939 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 PLXND1Q9Y4D7 1925 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 ABCA6Q8N139 1617 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 RAPGEF6Q8TEU7 1601 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 PLXNC1O60486 1568 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 LAMC3Q9Y6N6 1575 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 GLYATL1P3A0A0U1RQE8 302 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 A0A1B0GX51 115 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 RNF212BA8MTL3 300 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 H0YL77 283 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 HMGB3O15347 200 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 TAPBPO15533 448 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 HCRTR1O43613 425 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 OR7C2O60412 319 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 GALR3O60755 368 aaPredicted RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 EDF1O60869 148 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 ALOX12BO75342 701 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 RDH16O75452 317 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 CDS2O95674 445 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 OPN1SWP03999 348 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 VTNP04004 478 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 SHBGP04278 402 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 ADRA2AP08913 450 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 HIST1H2AGP0C0S8 130 aaPredicted RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 SP9P0CG40 484 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 SLC2A2P11168 524 aaPredicted RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 PSG2P11465 335 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 HSD17B1P14061 328 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 SPNP16150 400 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 EPCAMP16422 314 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 AOC1P19801 751 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 PRKACGP22612 351 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 CRHBPP24387 322 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 S100A2P29034 98 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 MIPP30301 263 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 LEPP41159 167 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 TSFMP43897 325 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 GABRA2P47869 451 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 VAMP7P51809 220 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 TMBIM6P55061 237 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 AQP5P55064 265 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 TCL1AP56279 114 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 TAS2R31P59538 309 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 TPI1P60174 286 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 PFN3P60673 137 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 GNG11P61952 73 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 PAFAH1B2P68402 229 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 SLC35B1P78383 322 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 CDK3Q00526 305 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 EWSR1Q01844 656 aaKnown RBP eCLIP1.99□□□□□ -2.09
XRN1-211ENST00000477237 CAV1Q03135 178 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 NME3Q13232 169 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 HTR4Q13639 388 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 RUNX3Q13761 415 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 MELKQ14680 651 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 GNMTQ14749 295 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 TMEM132DQ14C87 1099 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 OR8B8Q15620 311 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 SNRNP35Q16560 246 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 HIST3H3Q16695 136 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 UPP1Q16831 310 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 C4orf26Q17RF5 130 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 TRMT12Q53H54 448 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 MESTQ5EB52 335 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 AKR1C8PQ5T2L2 129 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 TPTE2P1Q5T6R2 138 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 HIST2H3PS2Q5TEC6 136 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 WDR59Q6PJI9 974 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 PAMR1Q6UXH9 720 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 FRRS1Q6ZNA5 592 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 FAM183BPQ6ZVS7 135 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 FBXO16Q8IX29 292 aaPredicted RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 OSR2Q8N2R0 312 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 MUC15Q8N387 334 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 ZNF664Q8N3J9 261 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms