RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TOR1AO14656 332 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 MGST3O14880 152 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 SYT7O43581 403 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 SYNGR1O43759 233 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 CHST1O43916 411 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 TNFRSF6BO95407 300 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 TTRP02766 147 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 MRPL3P09001 348 aaKnown RBP5.84□□□□□ -1.48
BRCA1-214ENST00000477152 CD28P10747 220 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 PRKACBP22694 351 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 GABRR1P24046 479 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 CDC42P60953 191 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 CXCR4P61073 352 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 ZNF273Q14593 569 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 SPIN3Q5JUX0 258 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 NXNL2Q5VZ03 156 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 Q6ZPA2 131 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 PLEKHG7Q6ZR37 379 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 CCDC197Q8NCU1 140 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 PP6455Q8WZ26 134 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 EMG1Q92979 244 aaKnown RBP5.84□□□□□ -1.48
BRCA1-214ENST00000477152 CCDC124Q96CT7 223 aaKnown RBP5.84□□□□□ -1.48
BRCA1-214ENST00000477152 C20orf173Q96LM9 149 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 CITED2Q99967 270 aaPredicted RBP5.84□□□□□ -1.48
BRCA1-214ENST00000477152 THTPAQ9BU02 230 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 MMP28Q9H239 520 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 RHOFQ9HBH0 211 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 SERTAD4Q9NUC0 356 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 WARS2Q9UGM6 360 aaKnown RBP5.84□□□□□ -1.48
BRCA1-214ENST00000477152 KLHDC2Q9Y2U9 406 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 LOC102723971A0A1B0GUV8 181 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 LEUTXA8MZ59 168 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 OOSP1A8MZH6 123 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 SH2D1BO14796 132 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 SULT1C4O75897 302 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 TFF1P04155 84 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 UBCP0CG48 685 aaKnown RBP5.83□□□□□ -1.48
BRCA1-214ENST00000477152 ERP29P30040 261 aaKnown RBP5.83□□□□□ -1.48
BRCA1-214ENST00000477152 SLC6A1P30531 599 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 RBP2P50120 134 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 MS4A2Q01362 244 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 TMED1Q13445 227 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 FLOT2Q14254 428 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 KPNB1Q14974 876 aaKnown RBP5.83□□□□□ -1.48
BRCA1-214ENST00000477152 GRK1Q15835 563 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 VAX1Q5SQQ9 334 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 UNQ9370/PRO34162Q6UXP9 181 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 LHFPL4Q7Z7J7 247 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 ADGRG5Q8IZF4 528 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 DNAAF1Q8NEP3 725 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 OR4D6Q8NGJ1 314 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 PIFOQ8TCI5 191 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 CANT1Q8WVQ1 401 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 C17orf50Q8WW18 174 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 RFKQ969G6 155 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 PHF21AQ96BD5 680 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 CPNE2Q96FN4 548 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-214ENST00000477152 ZNF488Q96MN9 340 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 FGF23Q9GZV9 251 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-214ENST00000477152 TMEM133Q9H2Q1 129 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 TAS2R3Q9NYW6 316 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 DPM3Q9P2X0 92 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 AMMECR1Q9Y4X0 333 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-214ENST00000477152 HILPDAQ9Y5L2 63 aa5.83□□□□□ -1.48
BRCA1-214ENST00000477152 IGHV2-26A0A0B4J1V2 119 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 RRP9O43818 475 aaKnown RBP5.82□□□□□ -1.48
BRCA1-214ENST00000477152 HAND1O96004 215 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 OR2T7P0C7T2 308 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 HCCSP53701 268 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 ERVK11-1P61568 191 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 EDDM3AQ14507 147 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 PTGES3Q15185 160 aaKnown RBP5.82□□□□□ -1.48
BRCA1-214ENST00000477152 DEFB121Q5J5C9 76 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 TMEM244Q5VVB8 128 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 Q6ZSR3 168 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 TMEM219Q86XT9 240 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 C11orf42Q8N5U0 333 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 WFDC9Q8NEX5 89 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 BBS1Q8NFJ9 593 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 TRMT10AQ8TBZ6 339 aaKnown RBP5.82□□□□□ -1.48
BRCA1-214ENST00000477152 TMEM163Q8TC26 289 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 APOL4Q9BPW4 351 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 AURKAIP1Q9NWT8 199 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-214ENST00000477152 DSCAML1Q8TD84 2053 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 NOTCH1P46531 2555 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 METTL15A6NJ78 407 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 SNTNA6NMZ2 147 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 GYG2O15488 501 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 FKBP6O75344 327 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 FAM106CPP0CH98 169 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 ZNF20P17024 532 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 HOXA5P20719 270 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 CCL1P22362 96 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 CEBPDP49716 269 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-214ENST00000477152 RAB13P51153 203 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 DLX6P56179 175 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 SLC35B1P78383 322 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 TMEM236Q5W0B7 351 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 HIST2H2BDQ6DRA6 164 aa5.82□□□□□ -1.48
BRCA1-214ENST00000477152 LIN54Q6MZP7 749 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms