RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CYB5R1Q9UHQ9 305 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 BZW2Q9Y6E2 419 aaKnown RBP1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 ITGB4P16144 1822 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 GSTTP1A0A1W2PQM5 241 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 H3BMM0 161 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 I3L4J1 428 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 ISLRO14498 428 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 ENSAO43768 121 aaKnown RBP1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 LIPCP11150 499 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 PSKH1P11801 424 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 CNTFRP26992 372 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 S100A2P29034 98 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 CRABP1P29762 137 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 PSMD8P48556 350 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 C2orf80Q0P641 193 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 NDUFAF6Q330K2 333 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 TMEM176BQ3YBM2 270 aaPredicted RBP1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 SPIN4Q56A73 249 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 ERICH5Q6P6B1 374 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 TPGS1Q6ZTW0 290 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 CCDC121Q6ZUS5 278 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 NIT1Q86X76 327 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 HS3ST5Q8IZT8 346 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 ATPAF2Q8N5M1 289 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 Q8NAQ8 132 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 DRAXINQ8NBI3 349 aaPredicted RBP1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 OR13C9Q8NGT0 318 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 GPR119Q8TDV5 335 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 DTD1Q8TEA8 209 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 HIST1H2BAQ96A08 127 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 CIDECQ96AQ7 238 aaPredicted RBP1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 UBE2WQ96B02 151 aa1.28□□□□□ -2.2
ECHDC1-213ENST00000474240 POLR3AO14802 1390 aaPredicted RBP1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 PHLPP2Q6ZVD8 1323 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 TRGV4A0A0C4DH28 118 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 OR5H14A6NHG9 310 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 ARGFXA6NJG6 315 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 A8MWP4 228 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 F5H5T6 163 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 OVOL1O14753 267 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 SLC2A1P11166 492 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 RPA3P35244 121 aaPredicted RBP1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 HSPA13P48723 471 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 TTPAP49638 278 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 VSNL1P62760 191 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 DYNC1I2Q13409 638 aaKnown RBP1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 ZNF181Q2M3W8 571 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 CEACAM21Q3KPI0 293 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 NKAIN1Q4KMZ8 207 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 GLYATQ6IB77 296 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 C16orf87Q6PH81 154 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 SSX6Q7RTT6 188 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 LYPD6Q86Y78 171 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 CLHC1Q8NHS4 586 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 SPPL2BQ8TCT7 592 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 PDCD6IPQ8WUM4 868 aaKnown RBP1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 IFT81Q8WYA0 676 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 GTF2H4Q92759 462 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 CPB2Q96IY4 423 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 OR2AG1Q9H205 316 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 PORCNQ9H237 461 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 SYT4Q9H2B2 425 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 ACOT13Q9NPJ3 140 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 KCNIP2Q9NS61 270 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 DDIT4Q9NX09 232 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 PCNX2A6NKB5 2137 aa1.27□□□□□ -2.21
ECHDC1-213ENST00000474240 BRD4O60885 1362 aaPredicted RBP1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 M0QXV9 152 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 RFXANKO14593 260 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 MYO1DO94832 1006 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 PYCR1P32322 319 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 RAB38P57729 211 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 VAMP3Q15836 100 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 CEACAM16Q2WEN9 425 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 ZCWPW2Q504Y3 356 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 CAVIN4Q5BKX8 364 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 SLC25A25Q6KCM7 469 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 NOXRED1Q6NXP6 359 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 OLIG3Q7RTU3 272 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 MSRB3Q8IXL7 192 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 ASCC1Q8N9N2 400 aaKnown RBP1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 OR2K2Q8NGT1 345 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 OR4A5Q8NH83 315 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 MFSD8Q8NHS3 518 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 MITD1Q8WV92 249 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 CMBLQ96DG6 245 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 ADTRPQ96IZ2 230 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 TAS2R9Q9NYW1 312 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 FBXL3Q9UKT7 428 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 MYO16Q9Y6X6 1858 aa1.26□□□□□ -2.21
ECHDC1-213ENST00000474240 MIA3Q5JRA6 1907 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 IGHV1-45A0A0A0MS14 117 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 TRAV8-3A0A0A6YYJ7 113 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 RBFOX3A6NFN3 312 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 TVP23AA6NH52 213 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 F8VP50 259 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 H3BP45 60 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 TOR1AO14656 332 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 KDELR3O43731 214 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 SH2D1AO60880 128 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms