RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 SCN1BQ07699 218 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 DCTN2Q13561 401 aaKnown RBP9.87□□□□□ -0.83
TRAF4-209ENST00000473421 KPNB1Q14974 876 aaKnown RBP9.87□□□□□ -0.83
TRAF4-209ENST00000473421 SPATS1Q496A3 300 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 AADACL4Q5VUY2 407 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 ZFAND6Q6FIF0 208 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 OR52W1Q6IF63 320 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 MEPCEQ7L2J0 689 aaKnown RBP9.87□□□□□ -0.83
TRAF4-209ENST00000473421 THNSL2Q86YJ6 484 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 CANT1Q8WVQ1 401 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 TOMM40LQ969M1 308 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 BORCS8Q96FH0 119 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 LYSTQ99698 3801 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 GAL3ST2Q9H3Q3 398 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 MOB1AQ9H8S9 216 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 TAS2R3Q9NYW6 316 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 TMEM14AQ9Y6G1 99 aa9.87□□□□□ -0.83
TRAF4-209ENST00000473421 SORL1Q92673 2214 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 IGHV3-72A0A0B4J1Y9 119 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 TRAV39A0A0B4J263 110 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 MITFO75030 526 aaPredicted RBP9.86□□□□□ -0.83
TRAF4-209ENST00000473421 IGKV1D-33P01593 117 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 IGKV1-33P01594 117 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 CHATP28329 748 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 CEACAM3P40198 252 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 MNDAP41218 407 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 PTGFRP43088 359 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 CRISP1P54107 249 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 HES1Q14469 280 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 ATXN7L3Q14CW9 347 aaPredicted RBP9.86□□□□□ -0.83
TRAF4-209ENST00000473421 PTGES3Q15185 160 aaKnown RBP9.86□□□□□ -0.83
TRAF4-209ENST00000473421 LTC4SQ16873 150 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 ASPHD1Q5U4P2 390 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 SLC35E3Q7Z769 313 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 YIPF7Q8N8F6 280 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 OR5D18Q8NGL1 313 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 RPEQ96AT9 228 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 CCDC124Q96CT7 223 aaKnown RBP9.86□□□□□ -0.83
TRAF4-209ENST00000473421 CLN6Q9NWW5 311 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 ZNF581Q9P0T4 197 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRAF4-209ENST00000473421 PSG11Q9UQ72 335 aa9.86□□□□□ -0.83
TRAF4-209ENST00000473421 LOC107986453A0A1B0GWG9 222 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 A0A1W2PQL4 384 aaPredicted RBP9.85□□□□□ -0.83
TRAF4-209ENST00000473421 OOSP1A8MZH6 123 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 ZNF670-ZNF695F2Z2N8 137 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 J3QR06 171 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 SLC33A1O00400 549 aaPredicted RBP9.85□□□□□ -0.83
TRAF4-209ENST00000473421 SH2D1BO14796 132 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 REG1BP48304 166 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 GNG10P50151 68 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 DAPP51397 102 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 PRRX1P54821 245 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 MTCP1P56278 107 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 PDZK1IP1Q13113 114 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 KIR2DS1Q14954 304 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 CDK5R1Q15078 307 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 ZNF260Q3ZCT1 412 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 KRBOX4Q5JUW0 171 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 SPIN3Q5JUX0 258 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 C9orf66Q5T8R8 295 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 ADAMTSL5Q6ZMM2 481 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 ENTHD1Q8IYW4 607 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 TCEANCQ8N8B7 351 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 OR4D6Q8NGJ1 314 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 OR5M8Q8NGP6 311 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 OR13A1Q8NGR1 328 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 OR10AC1Q8NH08 325 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 RFESDQ8TAC1 157 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 IL4I1Q96RQ9 567 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 PLEKHA1Q9HB21 404 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 EXOSC4Q9NPD3 245 aaKnown RBP9.85□□□□□ -0.83
TRAF4-209ENST00000473421 PLSCR3Q9NRY6 295 aa9.85□□□□□ -0.83
TRAF4-209ENST00000473421 ZNF256Q9Y2P7 627 aaPredicted RBP9.85□□□□□ -0.83
TRAF4-209ENST00000473421 KBTBD11-OT1A0A1B0GTJ5 212 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 ZNF736B4DX44 427 aaPredicted RBP9.84□□□□□ -0.83
TRAF4-209ENST00000473421 HSPB6O14558 160 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 GNGT2O14610 69 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 FGF16O43320 207 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 LYL1P12980 280 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 ATF1P18846 271 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 SLC6A1P30531 599 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 GPR12P47775 334 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 RBP2P50120 134 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 ARHGDIBP52566 201 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 CDC42P60953 191 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 CFHR3Q02985 330 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 CCDC144NLQ6NUI1 221 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 TEX38Q6PEX7 206 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 Q8IYB0 196 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 Q8N9W7 124 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 OR9G1Q8NH87 305 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 FGGYQ96C11 551 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 HSPB9Q9BQS6 159 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 COMMD4Q9H0A8 199 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 ZNF556Q9HAH1 456 aa9.84□□□□□ -0.83
TRAF4-209ENST00000473421 ZNF729A6NN14 1252 aaPredicted RBP9.83□□□□□ -0.84
TRAF4-209ENST00000473421 GATBO75879 557 aaKnown RBP9.83□□□□□ -0.84
TRAF4-209ENST00000473421 KDM4BO94953 1096 aa9.83□□□□□ -0.84
TRAF4-209ENST00000473421 LY86O95711 162 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms