RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 C1orf100Q5SVJ3 147 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 NCR3LG1Q68D85 454 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 AWAT2Q6E213 333 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 CD200R1LQ6Q8B3 271 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 OR4D6Q8NGJ1 314 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 LHX4Q969G2 390 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 JMJD8Q96S16 334 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 SLC6A7Q99884 636 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 CHST6Q9GZX3 395 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 IFT22Q9H7X7 185 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 ST3GAL6Q9Y274 331 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 IGHV1-69DA0A0B4J2H0 117 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 TRDV1A0A1B0GX56 115 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 IGHV1-69P01742 117 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 UBBP0CG47 229 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 SERPINA2P20848 420 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 PSMB9P28065 219 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 P2RX3P56373 397 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 EDDM3AQ14507 147 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 ZNF273Q14593 569 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 MPV17LQ2QL34 196 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 PIGYQ3MUY2 71 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 BCL6BQ8N143 479 aaPredicted RBP12.54□□□□□ -0.4
SDC3-203ENST00000471567 C11orf42Q8N5U0 333 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 C22orf15Q8WYQ4 148 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 TNFRSF14Q92956 283 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 C1orf147Q96MC9 270 aaPredicted RBP12.54□□□□□ -0.4
SDC3-203ENST00000471567 SIRT7Q9NRC8 400 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 LINC00312Q9Y6C7 94 aa12.54□□□□□ -0.4
SDC3-203ENST00000471567 TRAV24A0A0B4J272 114 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 C17orf98A8MV24 154 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 TNFAIP8O95379 198 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 RBP4P02753 201 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 ZNF728P0DKX0 622 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 RANBP1P43487 201 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 KCNJ3P48549 501 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 DLX6P56179 175 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 HILS1P60008 231 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 SYT6Q5T7P8 510 aaPredicted RBP12.53□□□□□ -0.4
SDC3-203ENST00000471567 RBMS3Q6XE24 437 aaKnown RBP12.53□□□□□ -0.4
SDC3-203ENST00000471567 BRD3OSQ6XYD6 125 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 PPA2Q9H2U2 334 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 PRDM13Q9H4Q3 707 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 NCOR1P1Q9H4R4 102 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 ATRQ13535 2644 aa12.53□□□□□ -0.4
SDC3-203ENST00000471567 TRAV1-2A0A0B4J238 106 aa12.52□□□□□ -0.41
SDC3-203ENST00000471567 RNASEK-C17orf49H0YIS7 233 aa12.52□□□□□ -0.41
SDC3-203ENST00000471567 CCL3L1P16619 93 aa12.52□□□□□ -0.41
SDC3-203ENST00000471567 CALRP27797 417 aaKnown RBP12.52□□□□□ -0.41
SDC3-203ENST00000471567 PSMD7P51665 324 aa12.52□□□□□ -0.41
SDC3-203ENST00000471567 UBE2E1P51965 193 aa12.52□□□□□ -0.41
SDC3-203ENST00000471567 ERVFRD-1P60508 538 aa12.52□□□□□ -0.41
SDC3-203ENST00000471567 PAX5Q02548 391 aa12.52□□□□□ -0.41
SDC3-203ENST00000471567 PAN3Q58A45 887 aaKnown RBP12.52□□□□□ -0.41
SDC3-203ENST00000471567 SIGLECL1Q8N7X8 197 aa12.52□□□□□ -0.41
SDC3-203ENST00000471567 CORO2AQ92828 525 aa12.52□□□□□ -0.41
SDC3-203ENST00000471567 ZNF714Q96N38 554 aa12.52□□□□□ -0.41
SDC3-203ENST00000471567 CST11Q9H112 138 aa12.52□□□□□ -0.41
SDC3-203ENST00000471567 HEXA-AS1Q9H8Q6 139 aa12.52□□□□□ -0.41
SDC3-203ENST00000471567 UBE2J1Q9Y385 318 aaPredicted RBP12.52□□□□□ -0.41
SDC3-203ENST00000471567 A0A087WXM4 84 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 TRGV10A0A0A0MS01 117 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 A0A1W2PP11 408 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A10PA6NDY2 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A18PA6NE21 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A16PA6NEW6 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A20PA6NIJ5 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A8PA6NJQ4 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A7PA6NKC0 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A22PA8MWA6 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A12PA8MX19 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A5PA8MXJ8 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A23PA8MXZ1 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 H3BUI4 141 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 GEMIN2O14893 280 aaKnown RBP12.51□□□□□ -0.41
SDC3-203ENST00000471567 SLC22A1O15245 554 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 OR7C1O76099 320 aaPredicted RBP12.51□□□□□ -0.41
SDC3-203ENST00000471567 VENTXO95231 258 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A15PP0C7V4 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A13PP0C7W8 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A14PP0C7W9 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 FAM90A24PP0C7X0 464 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 MGMTP16455 207 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 HTR2CP28335 458 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 AESQ08117 197 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 KRBOX4Q5JUW0 171 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 RUSC1-AS1Q66K80 236 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 TCF23Q7RTU1 214 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 TPRX1Q8N7U7 411 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 OR6M1Q8NGM8 313 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 ZFAND2BQ8WV99 257 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 TMEM158Q8WZ71 300 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 COQ2Q96H96 371 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 ZNF48Q96MX3 618 aaPredicted RBP12.51□□□□□ -0.41
SDC3-203ENST00000471567 BARHL1Q9BZE3 327 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 SPACA1Q9HBV2 294 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 TAS2R3Q9NYW6 316 aa12.51□□□□□ -0.41
SDC3-203ENST00000471567 ODAMA1E959 279 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 SLC17A2O00624 439 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 PDCD5O14737 125 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms