RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 RBMX2Q9Y388 322 aaKnown RBP8.19□□□□□ -1.1
SF3A1-207ENST00000471342 NOTCH2Q04721 2471 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 TRBV6-6A0A0A6YYG2 114 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 hCG_1807616A0A1W2PRN6 198 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 C22orf46C9J442 243 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 FAM157AC9JC47 383 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 CA11O75493 328 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 CYB5AP00167 134 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 MT-ND4P03905 459 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 TK1P04183 234 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 CSN2P05814 226 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 CHRM2P08172 466 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 GNB3P16520 340 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 NAT1P18440 290 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 FUT3P21217 361 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 BAK1Q16611 211 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 HFEQ30201 348 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 ZNF497Q6ZNH5 498 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 DCDC5Q6ZRR9 648 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 LYSMD2Q8IV50 215 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 BOLLQ8N9W6 283 aaKnown RBP8.18□□□□□ -1.1
SF3A1-207ENST00000471342 PNLDC1Q8NA58 520 aaKnown RBP8.18□□□□□ -1.1
SF3A1-207ENST00000471342 WFDC11Q8NEX6 87 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 MRPL30Q8TCC3 161 aaKnown RBP8.18□□□□□ -1.1
SF3A1-207ENST00000471342 GPX8Q8TED1 209 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 RAB40AQ8WXH6 277 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 FOXC2Q99958 501 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 CST11Q9H112 138 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 ELL3Q9HB65 397 aaPredicted RBP8.18□□□□□ -1.1
SF3A1-207ENST00000471342 NEK6Q9HC98 313 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 MBNL3Q9NUK0 354 aaKnown RBP8.18□□□□□ -1.1
SF3A1-207ENST00000471342 AK3Q9UIJ7 227 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 ADAM30Q9UKF2 790 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 POLR3KQ9Y2Y1 108 aaPredicted RBP8.18□□□□□ -1.1
SF3A1-207ENST00000471342 MALRD1Q5VYJ5 2156 aa8.18□□□□□ -1.1
SF3A1-207ENST00000471342 CELSR1Q9NYQ6 3014 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 CCDC168Q8NDH2 2452 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 TRAV18A0A075B6X5 111 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 A0A0A6YYH2 397 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 TRAV39A0A0B4J263 110 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 IGKV1-6A0A0C4DH72 117 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 A6NJ64 397 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 CLDN25C9JDP6 229 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 C15orf65H3BRN8 121 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 SIRPB1O00241 398 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 CTDSPLO15194 276 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 TPPPO94811 219 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 GLAP06280 429 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 GABRR1P24046 479 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 BLVRBP30043 206 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-207ENST00000471342 GDNFP39905 211 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 MDH2P40926 338 aaKnown RBP8.17□□□□□ -1.1
SF3A1-207ENST00000471342 GLIPR1P48060 266 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 PITPNBP48739 271 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 ERVFRD-1P60508 538 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 C17orf58Q2M2W7 97 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 CDNFQ49AH0 187 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 WDR25Q64LD2 544 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-207ENST00000471342 RAB12Q6IQ22 244 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 LINC00596Q86U02 117 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 LDLRAD3Q86YD5 345 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 TPRX1Q8N7U7 411 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 OR11L1Q8NGX0 322 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 AP3S1Q92572 193 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 HPS1Q92902 700 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 SNAPC3Q92966 411 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 CPNE2Q96FN4 548 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-207ENST00000471342 SNX22Q96L94 193 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 DPCDQ9BVM2 203 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-207ENST00000471342 C6orf62Q9GZU0 229 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-207ENST00000471342 CHST6Q9GZX3 395 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 ATG5Q9H1Y0 275 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 NCOR1P1Q9H4R4 102 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 LINC00574Q9H8X3 128 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 EXTL2Q9UBQ6 330 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 PEX16Q9Y5Y5 336 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 ZANQ9Y493 2812 aa8.17□□□□□ -1.1
SF3A1-207ENST00000471342 TRAV38-1A0A0B4J264 116 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 TMEM235A6NFC5 223 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 A8MXK9 166 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 DVL1O14640 695 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 DEGS1O15121 323 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 TPD52L2O43399 206 aaKnown RBP8.16□□□□□ -1.1
SF3A1-207ENST00000471342 PPIHO43447 177 aaKnown RBP8.16□□□□□ -1.1
SF3A1-207ENST00000471342 GSTZ1O43708 216 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-207ENST00000471342 NOL3O60936 208 aaKnown RBP8.16□□□□□ -1.1
SF3A1-207ENST00000471342 MMP23AO75900 390 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 OCMP0CE72 109 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-207ENST00000471342 CPT2P23786 658 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 ERP29P30040 261 aaKnown RBP8.16□□□□□ -1.1
SF3A1-207ENST00000471342 SOX6P35712 828 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 GPR6P46095 362 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-207ENST00000471342 PDLIM4P50479 330 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 DGCR2P98153 550 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 HERPUD1Q15011 391 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 MICBQ29980 383 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 CLEC12BQ2HXU8 276 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 SMIM21Q3B7S5 101 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 HACD4Q5VWC8 232 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 BAIAP2L2Q6UXY1 529 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms