RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 TMEM59Q9BXS4 323 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 SELENOIQ9C0D9 397 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 SHARPINQ9H0F6 387 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 KPTNQ9Y664 436 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 hADV38S2A0JD32 116 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 TMEM82A0PJX8 343 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 MCRIP1C9JLW8 97 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 SLC33A1O00400 549 aaPredicted RBP10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 GEMIN2O14893 280 aaKnown RBP10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 LDLRAD4O15165 306 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 SCGNO76038 276 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 BPIFB3P59826 476 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 TAF9Q16594 264 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 CTF1Q16619 201 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 PIGYQ3MUY2 71 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 PAN3Q58A45 887 aaKnown RBP10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 GPR107Q5VW38 600 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 FAHD2BQ6P2I3 314 aaPredicted RBP10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 SFXN4Q6P4A7 337 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 USP43Q70EL4 1123 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 BATF2Q8N1L9 274 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 TMEM104Q8NE00 496 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 OR51D1Q8NGF3 324 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 OR56B1Q8NGI3 324 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 FAHD2AQ96GK7 314 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 C7orf69Q9H7B7 122 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 LIN7BQ9HAP6 207 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 ABRACLQ9P1F3 81 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 RCC2Q9P258 522 aaKnown RBP10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 CDC42EP3Q9UKI2 254 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 ETV7Q9Y603 341 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 DOCK11Q5JSL3 2073 aa10.45□□□□□ -0.74
SPTLC1-204ENST00000469778 TRAV24A0A0B4J272 114 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 M0R1W7 72 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 SIRPB1O00241 398 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 PSPNO60542 156 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 NOL3O60936 208 aaKnown RBP10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 MPIG6BO95866 241 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 RBP4P02753 201 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 ZNF16P17020 682 aaPredicted RBP10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 RPS19P39019 145 aaKnown RBP10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 OR3A1P47881 315 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 P2RX3P56373 397 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 OR10A3P58181 314 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 P2RY14Q15391 338 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 SLC35E4Q6ICL7 350 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 RAB12Q6IQ22 244 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 SLC16A12Q6ZSM3 486 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 ZNF565Q8N9K5 539 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 H1FXQ92522 213 aaKnown RBP10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 CORO2AQ92828 525 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 SLC25A46Q96AG3 418 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 NEDD4LQ96PU5 975 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 DPCDQ9BVM2 203 aaPredicted RBP10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 RIMS4Q9H426 269 aaPredicted RBP10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 BANF2Q9H503 90 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 LPAR2Q9HBW0 351 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 RAB9BQ9NP90 201 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 MMP26Q9NRE1 261 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 OR6C3Q9NZP0 311 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 IL36RNQ9UBH0 155 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 HSF4Q9ULV5 492 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 UBE2J1Q9Y385 318 aaPredicted RBP10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 AUP1Q9Y679 476 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 HIVEP2P31629 2446 aa10.44□□□□□ -0.74
SPTLC1-204ENST00000469778 ZANQ9Y493 2812 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 A0A0A6YYH2 397 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 A0A1B0GW55 424 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 A0A1W2PQ09 198 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 A6NJ64 397 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 C22orf46C9J442 243 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 ZNF701M0R085 212 aaPredicted RBP10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 PDCD6O75340 191 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 DUX4L2P0CJ85 424 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 DUX4L3P0CJ86 424 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 DUX4L4P0CJ87 422 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 DUX4L5P0CJ88 424 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 DUX4L6P0CJ89 424 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 DUX4L7P0CJ90 424 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 GZMHP20718 246 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 CEBPDP49716 269 aaPredicted RBP10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 RORCP51449 518 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 SNU13P55769 128 aaKnown RBP10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 MXD1Q05195 221 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 UNC119Q13432 240 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 PDCD1Q15116 288 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 CR1LQ2VPA4 569 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 ATAD3CQ5T2N8 411 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 HES5Q5TA89 166 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 METTL11BQ5VVY1 283 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 TMEM200BQ69YZ2 307 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 DUX4L9Q6RFH8 374 aaPredicted RBP10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 NR2C2APQ86WQ0 139 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 SUMF2Q8NBJ7 301 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 OR4S1Q8NGB4 309 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 NANPQ8TBE9 248 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 ACOT12Q8WYK0 555 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 AP3S1Q92572 193 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 FAM46BQ96A09 425 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 CMTM3Q96MX0 182 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms