RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CAB39Q9Y376 341 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-208ENST00000469585 WIPI2Q9Y4P8 454 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 PPIAL4AQ9Y536 164 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 MAST4O15021 2626 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 TRBV2A0A0J9YWF9 115 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 hCG_38984A0A1B0GV85 526 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 hCG_1809904A0A1W2PP81 198 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 A0A1W2PPE2 198 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 A0A1W2PR64 198 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 A0A1W2PRV1 198 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 LRP5LA4QPB2 252 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 ANKRD61A6NGH8 418 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 CYSRT1A8MQ03 144 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 ZNF850A8MQ14 1090 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 LYNX1G3V0Z9 82 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 TMEM178BH3BS89 294 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 DLGAP1O14490 977 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 LY6G6DO95868 133 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 CST4P01036 141 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 HLA-DPB1P04440 258 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 MSMBP08118 114 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 LYNX1P0DP58 116 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 MMP9P14780 707 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 MYOD1P15172 320 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 MUC1P15941 1255 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-208ENST00000469585 COL8A2P25067 703 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 MAPK3P27361 379 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-208ENST00000469585 VHLP40337 213 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 GPM6AP51674 278 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 CAPZA1P52907 286 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 HCCSP53701 268 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 ATP1B3P54709 279 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 FAM3AP98173 230 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 CEACAM21Q3KPI0 293 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 CCDC58Q4VC31 144 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 ZNF585BQ52M93 769 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 TP53I3Q53FA7 332 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 LRRC10Q5BKY1 277 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 LIPNQ5VXI9 398 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 FAHD2BQ6P2I3 314 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-208ENST00000469585 RBMS3Q6XE24 437 aaKnown RBP5.18□□□□□ -1.58
PTCD3-208ENST00000469585 NAA40Q86UY6 237 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 TMEM219Q86XT9 240 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 MKXQ8IYA7 352 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 Q8IYB0 196 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 ELMOD2Q8IZ81 293 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 ZSCAN4Q8NAM6 433 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-208ENST00000469585 MAPK1IP1LQ8NDC0 245 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 BPIFB6Q8NFQ5 453 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 OR5A2Q8NGI9 324 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 OR10S1Q8NGN2 331 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 RHOXF1Q8NHV9 184 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 ZNRF4Q8WWF5 429 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 SGK3Q96BR1 496 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 FAHD2AQ96GK7 314 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 C4orf36Q96KX1 117 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 MBOAT4Q96T53 435 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 GPER1Q99527 375 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 SLC29A1Q99808 456 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 MND1Q9BWT6 205 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 CCDC90BQ9GZT6 254 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 FAM206AQ9NX38 181 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 CNOT2Q9NZN8 540 aaKnown RBP5.18□□□□□ -1.58
PTCD3-208ENST00000469585 CLN8Q9UBY8 286 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 SLC22A13Q9Y226 551 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 POLQO75417 2590 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 PRR14LQ5THK1 2151 aa5.18□□□□□ -1.58
PTCD3-208ENST00000469585 PRRC2AP48634 2157 aaKnown RBP5.17□□□□□ -1.58
PTCD3-208ENST00000469585 IGHV4-61A0A0C4DH41 118 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 LOC107986453A0A1B0GWG9 222 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 FAM230AA0A1W2PPH8 454 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 OOEPA6NGQ2 149 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 ZNF732B4DXR9 585 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 TRAPPC2LH3BP13 241 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 J3QLI3 93 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 LGALS8O00214 317 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 SLC1A7O00341 560 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 P2RY10O00398 339 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 NDUFB3O43676 98 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 NXPH2O95156 264 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 CYB5R3P00387 301 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-208ENST00000469585 PNPP00491 289 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 HCKP08631 526 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 GLRA1P23415 457 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 HAAOP46952 286 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 PITPNBP48739 271 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 RBP2P50120 134 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 FUT6P51993 359 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 DVL1P1P54792 670 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-208ENST00000469585 RELQ04864 619 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-208ENST00000469585 RIPK1Q13546 671 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 ARMCX4Q5H9R4 360 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 C6orf52Q5T4I8 152 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 RPL22L1Q6P5R6 122 aaKnown RBP5.17□□□□□ -1.58
PTCD3-208ENST00000469585 IZUMO2Q6UXV1 221 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 AHSA2Q719I0 299 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 LHFPL3Q86UP9 236 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 CATSPERDQ86XM0 798 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 SERPINA12Q8IW75 414 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms