RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 NR4A2P43354 598 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 KCNJ3P48549 501 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 EFNB2P52799 333 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 EDDM3BP56851 147 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 GNG2P59768 71 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 GNB2P62879 340 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 HOXA4Q00056 320 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-216ENST00000468949 ARFRP1Q13795 201 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 IL18Q14116 193 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 EDDM3AQ14507 147 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 ATXN7L3Q14CW9 347 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-216ENST00000468949 PDCD1Q15116 288 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 GRK1Q15835 563 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 PRSS57Q6UWY2 283 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 Q6ZTK2 550 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 Q8NFD4 153 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 OR5D13Q8NGL4 314 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 OR10R2Q8NGX6 335 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 ANGPTL6Q8NI99 470 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 C15orf40Q8WUR7 153 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 H1FXQ92522 213 aaKnown RBP6.79□□□□□ -1.32
HDAC6-216ENST00000468949 SLC25A38Q96DW6 304 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 NEIL1Q96FI4 390 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-216ENST00000468949 Q96MF0 132 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 TMEM246Q9BRR3 403 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 NICN1Q9BSH3 213 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 DPCDQ9BVM2 203 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-216ENST00000468949 CHST6Q9GZX3 395 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 LPAR5Q9H1C0 372 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 ABCG5Q9H222 651 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 PPA2Q9H2U2 334 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 ING3Q9NXR8 418 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 ETAA1Q9NY74 926 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 SLC25A10Q9UBX3 287 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-216ENST00000468949 CLN8Q9UBY8 286 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 ARFGEF3Q5TH69 2177 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 HIVEP1P15822 2718 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 TRAV18A0A075B6X5 111 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 IGHV4-30-2A0A087WSY4 118 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 A0A1W2PPH5 198 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 A0A1W2PQ09 198 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 SERPINE3A8MV23 424 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 H7C1Q1 480 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 SLC33A1O00400 549 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-216ENST00000468949 CTDSP2O14595 271 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 EIF4EP06730 217 aaKnown RBP6.78□□□□□ -1.32
HDAC6-216ENST00000468949 HIST1H1DP16402 221 aaKnown RBP6.78□□□□□ -1.32
HDAC6-216ENST00000468949 USF1P22415 310 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-216ENST00000468949 CDK2P24941 298 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 RBMXP38159 391 aaKnown RBP6.78□□□□□ -1.32
HDAC6-216ENST00000468949 NPY4RP50391 375 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 QRFPP83859 136 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 PITPNAQ00169 270 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 CNIH2Q6PI25 160 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 FAM131AQ6UXB0 335 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 TRAPPC6BQ86SZ2 158 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 KRTAP1-3Q8IUG1 177 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 IZUMO1Q8IYV9 350 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 CMTM4Q8IZR5 234 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 OR8H2Q8N162 312 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 CD177Q8N6Q3 437 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 FAM216BQ8N7L0 139 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 SUMF2Q8NBJ7 301 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 ZNRF1Q8ND25 227 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 WFDC11Q8NEX6 87 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 SETD6Q8TBK2 473 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 SDSLQ96GA7 329 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 SNX22Q96L94 193 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 GAFA1Q96PS6 74 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 NUDT16L1Q9BRJ7 211 aaKnown RBP6.78□□□□□ -1.32
HDAC6-216ENST00000468949 SSBP3Q9BWW4 388 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-216ENST00000468949 FAM234AQ9H0X4 552 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 IFT22Q9H7X7 185 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 TMEM165Q9HC07 324 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 IFT46Q9NQC8 304 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 RABL2AQ9UBK7 228 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-216ENST00000468949 KAAG1Q9UBP8 84 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 LPAR3Q9UBY5 353 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 RABL2BQ9UNT1 228 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 MRPS7Q9Y2R9 242 aaKnown RBP6.78□□□□□ -1.32
HDAC6-216ENST00000468949 TANC2Q9HCD6 1990 aa6.78□□□□□ -1.32
HDAC6-216ENST00000468949 DYSFO75923 2080 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 TMEM30CPA0ZSE6 113 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 UBE2QL1A1L167 161 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 FABP12A6NFH5 140 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 DVL1O14640 695 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 MGST3O14880 152 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 SOCS1O15524 211 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 XRCC3O43542 346 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 IGHV2-5P01817 119 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 TFF1P04155 84 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 TK1P04183 234 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 GLAP06280 429 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 GSTP1P09211 210 aaKnown RBP6.77□□□□□ -1.33
HDAC6-216ENST00000468949 FOSL1P15407 271 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 GNB3P16520 340 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 ELK1P19419 428 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 CHATP28329 748 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 GLP1RP43220 463 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 RIPPLY3P57055 190 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms