RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SLC25A15Q9Y619 301 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 NUP160Q12769 1436 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 CROCCQ5TZA2 2017 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 PRRC2AP48634 2157 aaKnown RBP2.73□□□□□ -1.97
VPS50-209ENST00000467326 ATRXP46100 2492 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 IGHV1OR15-1A0A075B7D0 117 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 TRAV8-6A0A0B4J262 113 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 FAM168BA1KXE4 195 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 D6RAR5 112 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 H0Y9J4 135 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 C15orf65H3BRN8 121 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 H7C417 338 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 BHLHE40O14503 412 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 FOXH1O75593 365 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 S1PR2O95136 353 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 APOC1P02654 83 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 PPBPP02775 128 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 FAM228BP0C875 321 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 SPNP16150 400 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 TCN2P20062 427 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 RAB3AP20336 220 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 TAC1P20366 129 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 SLC6A1P30531 599 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 DRD3P35462 400 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 P2RX1P51575 399 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 P2RY4P51582 365 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 CCL23P55773 120 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 RIPPLY3P57055 190 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 RAB2AP61019 212 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 LYZP61626 148 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 AP1S1P61966 158 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 GNG3P63215 75 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 RPS21P63220 83 aaKnown RBP2.73□□□□□ -1.97
VPS50-209ENST00000467326 GTF2BQ00403 316 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 ARFRP1Q13795 201 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 CDK10Q15131 360 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 PRSS8Q16651 343 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 TMEM255AQ5JRV8 349 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 C1orf100Q5SVJ3 147 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 FAM162BQ5T6X4 162 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 XKRXQ6PP77 449 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 CYHR1Q6ZMK1 362 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 C6orf120Q7Z4R8 191 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 C17orf82Q86X59 251 aaPredicted RBP2.73□□□□□ -1.97
VPS50-209ENST00000467326 CLVS1Q8IUQ0 354 aaPredicted RBP2.73□□□□□ -1.97
VPS50-209ENST00000467326 FAM71E2Q8N5Q1 922 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 ZNF439Q8NDP4 499 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 SLC26A10Q8NG04 563 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 OR10J6PQ8NGY7 276 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 VN1R17PQ8TDU5 208 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 YIPF5Q969M3 257 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 TAMM41Q96BW9 452 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 DCPSQ96C86 337 aaKnown RBP2.73□□□□□ -1.97
VPS50-209ENST00000467326 SEH1LQ96EE3 360 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 GALNT14Q96FL9 552 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 AURKBQ96GD4 344 aaPredicted RBP2.73□□□□□ -1.97
VPS50-209ENST00000467326 OR5M11Q96RB7 305 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 OR52E6Q96RD3 313 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 ZNF184Q99676 751 aaPredicted RBP2.73□□□□□ -1.97
VPS50-209ENST00000467326 POLR2J2Q9GZM3 115 aaKnown RBP2.73□□□□□ -1.97
VPS50-209ENST00000467326 POLR2J3Q9H1A7 115 aaKnown RBP2.73□□□□□ -1.97
VPS50-209ENST00000467326 DCSTAMPQ9H295 470 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 SRMSQ9H3Y6 488 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 MTFP1Q9UDX5 166 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 ANGPT4Q9Y264 503 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 PRELID3BQ9Y3B1 194 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 UGT2A1Q9Y4X1 527 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 HES2Q9Y543 173 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 NPHP4O75161 1426 aaPredicted RBP2.73□□□□□ -1.97
VPS50-209ENST00000467326 POGZQ7Z3K3 1410 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 SYNMO15061 1565 aa2.73□□□□□ -1.97
VPS50-209ENST00000467326 NRCAMQ92823 1304 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 IGLV1-36A0A0B4J1U3 117 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 A0A1B0GV50 99 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 PQLC2LA1A4F0 135 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 CCDC144AA2RUR9 1427 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 RBFOX3A6NFN3 312 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 TRIM49D1C9J1S8 452 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 MANBAO00462 879 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 SLC31A2O15432 143 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 NDUFS5O43920 106 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 CRYZL1O95825 349 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 LY6G6DO95868 133 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 SULT1A3P0DMM9 295 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 SULT1A4P0DMN0 295 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 LAMP1P11279 417 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 NELFEP18615 380 aaKnown RBP2.72□□□□□ -1.97
VPS50-209ENST00000467326 CD34P28906 385 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 DDTP30046 118 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 OR1E2P47887 323 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 SLC18A1P54219 525 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 TAS2R19P59542 299 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 PFN3P60673 137 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 SNAP25P60880 206 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 ZNF45Q02386 682 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 EMX1Q04741 257 aaPredicted RBP2.72□□□□□ -1.97
VPS50-209ENST00000467326 CD47Q08722 323 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 INCA1Q0VD86 236 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 EBPQ15125 230 aaKnown RBP2.72□□□□□ -1.97
VPS50-209ENST00000467326 ATP6AP1LQ52LC2 224 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms