RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 OR6C3Q9NZP0 311 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 EXOGQ9Y2C4 368 aaKnown RBP14.11□□□□□ -0.15
COL7A1-206ENST00000466591 WNK1Q9H4A3 2382 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 A0A1W2PRX2 142 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 ODAMA1E959 279 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 SULT1B1O43704 296 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 KDM4BO94953 1096 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 JUNBP17275 347 aaPredicted RBP14.1□□□□□ -0.15
COL7A1-206ENST00000466591 RAB3AP20336 220 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 GLIPR1P48060 266 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 GALEQ14376 348 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 KHDC1LQ5JSQ8 128 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 C9orf152Q5JTZ5 239 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 SAXO1Q8IYX7 474 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 SGCDQ92629 289 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 CITED2Q99967 270 aaPredicted RBP14.1□□□□□ -0.15
COL7A1-206ENST00000466591 AMBNQ9NP70 447 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 INPP5EQ9NRR6 644 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 AASSQ9UDR5 926 aa14.1□□□□□ -0.15
COL7A1-206ENST00000466591 OR4C45A6NMZ5 311 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 MT-ND2P03891 347 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 CD2P06729 351 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 GLP1RP43220 463 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 OR3A4PP47883 348 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 BLCAPP62952 87 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 RSU1Q15404 277 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 KISS1Q15726 138 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 PAN3Q58A45 887 aaKnown RBP14.09□□□□□ -0.15
COL7A1-206ENST00000466591 CCDC144NLQ6NUI1 221 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 HEPN1Q6WQI6 88 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 C16orf82Q7Z2V1 217 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 Q8N2B8 174 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 SYS1Q8N2H4 156 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 ZNF565Q8N9K5 539 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 ZNF555Q8NEP9 628 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 HAVCR2Q8TDQ0 301 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 S100A13Q99584 98 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 SLC25A33Q9BSK2 321 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 MYRFQ9Y2G1 1151 aa14.09□□□□□ -0.15
COL7A1-206ENST00000466591 RPL36Q9Y3U8 105 aaKnown RBP14.09□□□□□ -0.15
COL7A1-206ENST00000466591 AMMECR1Q9Y4X0 333 aaPredicted RBP14.09□□□□□ -0.15
COL7A1-206ENST00000466591 IGKV1-12A0A0C4DH73 117 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 ZNF729A6NN14 1252 aaPredicted RBP14.08□□□□□ -0.16
COL7A1-206ENST00000466591 H0YJX3 145 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 J3QRE1 110 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 MMP23AO75900 390 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 IGKV1D-12P01611 117 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 CD33P20138 364 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 CD24P25063 80 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 MTNR1BP49286 362 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 RAB40BQ12829 278 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 ZSCAN26Q16670 478 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 TMEM95Q3KNT9 176 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 KLHL22Q53GT1 634 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 LDLRAD2Q5SZI1 272 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 ZNF691Q5VV52 312 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 REC114Q7Z4M0 266 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 OR5AU1Q8NGC0 362 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 OR4P4Q8NGL7 312 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 TNFAIP8L1Q8WVP5 186 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 BARHL1Q9BZE3 327 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 MMP28Q9H239 520 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 ISG20L2Q9H9L3 353 aaKnown RBP14.08□□□□□ -0.16
COL7A1-206ENST00000466591 LIN7BQ9HAP6 207 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 ERVK13-1Q9NX77 482 aa14.08□□□□□ -0.16
COL7A1-206ENST00000466591 MEIKINA0A087WXM9 373 aa14.07□□□□□ -0.16
COL7A1-206ENST00000466591 LOC100130705A0A1B0GUX0 176 aa14.07□□□□□ -0.16
COL7A1-206ENST00000466591 SLC33A1O00400 549 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-206ENST00000466591 BAG2O95816 211 aa14.07□□□□□ -0.16
COL7A1-206ENST00000466591 PF4P02776 101 aa14.07□□□□□ -0.16
COL7A1-206ENST00000466591 CSN2P05814 226 aa14.07□□□□□ -0.16
COL7A1-206ENST00000466591 C21orf33P30042 268 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-206ENST00000466591 SOX2P48431 317 aa14.07□□□□□ -0.16
COL7A1-206ENST00000466591 PPP3R1P63098 170 aa14.07□□□□□ -0.16
COL7A1-206ENST00000466591 BDH1Q02338 343 aa14.07□□□□□ -0.16
COL7A1-206ENST00000466591 ABCA11PQ4W5N1 156 aa14.07□□□□□ -0.16
COL7A1-206ENST00000466591 OR4X2Q8NGF9 303 aa14.07□□□□□ -0.16
COL7A1-206ENST00000466591 RPEQ96AT9 228 aa14.07□□□□□ -0.16
COL7A1-206ENST00000466591 PDCD1LG2Q9BQ51 273 aa14.07□□□□□ -0.16
COL7A1-206ENST00000466591 ZNF286AQ9HBT8 521 aa14.07□□□□□ -0.16
COL7A1-206ENST00000466591 H3BNX3 289 aa14.06□□□□□ -0.16
COL7A1-206ENST00000466591 ZFPL1O95159 310 aa14.06□□□□□ -0.16
COL7A1-206ENST00000466591 CLIC3O95833 236 aa14.06□□□□□ -0.16
COL7A1-206ENST00000466591 LPLP06858 475 aa14.06□□□□□ -0.16
COL7A1-206ENST00000466591 LMO1P25800 156 aa14.06□□□□□ -0.16
COL7A1-206ENST00000466591 HES1Q14469 280 aa14.06□□□□□ -0.16
COL7A1-206ENST00000466591 LTC4SQ16873 150 aa14.06□□□□□ -0.16
COL7A1-206ENST00000466591 BEAN1Q3B7T3 259 aa14.06□□□□□ -0.16
COL7A1-206ENST00000466591 TMPRSS11AQ6ZMR5 421 aa14.06□□□□□ -0.16
COL7A1-206ENST00000466591 CORO2AQ92828 525 aa14.06□□□□□ -0.16
COL7A1-206ENST00000466591 TOMM40LQ969M1 308 aa14.06□□□□□ -0.16
COL7A1-206ENST00000466591 RNF166Q96A37 237 aaPredicted RBP14.06□□□□□ -0.16
COL7A1-206ENST00000466591 PCDHB16Q9NRJ7 776 aa14.06□□□□□ -0.16
COL7A1-206ENST00000466591 TCRBV4S1A1TA0A5B7 111 aa14.05□□□□□ -0.16
COL7A1-206ENST00000466591 M0QZK8 103 aa14.05□□□□□ -0.16
COL7A1-206ENST00000466591 HTR3BO95264 441 aa14.05□□□□□ -0.16
COL7A1-206ENST00000466591 PRB2P02812 416 aaPredicted RBP14.05□□□□□ -0.16
COL7A1-206ENST00000466591 CSTBP04080 98 aaKnown RBP14.05□□□□□ -0.16
COL7A1-206ENST00000466591 FAM106CPP0CH98 169 aa14.05□□□□□ -0.16
COL7A1-206ENST00000466591 MYL12AP19105 171 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms