RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 ANKRD55Q3KP44 614 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 C11orf87Q6NUJ2 197 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 Q6ZPA2 131 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 WDR86Q86TI4 376 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 RDH8Q9NYR8 311 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 IGHV1-18A0A0C4DH31 117 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 IQCF6A8MYZ5 107 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 C3orf80F5H4A9 247 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 TRIM77I1YAP6 450 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 I3L521 148 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 RPS2P15880 293 aaKnown RBP15.56■□□□□ 0.08
COL9A3-205ENST00000466192 DUSP1P28562 367 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 CEACAM8P31997 349 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-205ENST00000466192 IL24Q13007 206 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 ATXN7L3Q14CW9 347 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-205ENST00000466192 ZNF286AQ9HBT8 521 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 SLC25A15Q9Y619 301 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 ADAP1O75689 374 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 RHBDL1O75783 438 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 PMELP40967 661 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 GSG1LQ6UXU4 331 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 COQ8AQ8NI60 647 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 RTL8AQ9BWD3 113 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 PKIBQ9C010 78 aa15.56■□□□□ 0.08
COL9A3-205ENST00000466192 HSPB6O14558 160 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 GLI4P10075 376 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 PRKACAP17612 351 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 ECI1P42126 302 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 CLLU1Q5K131 121 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 DHRS11Q6UWP2 260 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 TOMM40LQ969M1 308 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 ADAT1Q9BUB4 502 aaKnown RBP15.55■□□□□ 0.08
COL9A3-205ENST00000466192 WDR13Q9H1Z4 485 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 AMDHD2Q9Y303 409 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 CADP27708 2225 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 TLN1Q9Y490 2541 aaKnown RBP15.55■□□□□ 0.08
COL9A3-205ENST00000466192 IGHV2OR16-5A0A0B4J2B6 119 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 RPS10-NUDT3A0A1W2PQS6 291 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 MPTX1A8MV57 137 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 TSPAN9O75954 239 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 CALCRP30988 508 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 FAM76BQ5HYJ3 339 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 TMEM211Q6ICI0 200 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 TMEM65Q6PI78 240 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 LHFPL5Q8TAF8 219 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 SFXN3Q9BWM7 321 aa15.55■□□□□ 0.08
COL9A3-205ENST00000466192 CHMP1AQ9HD42 196 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-205ENST00000466192 RCC2Q9P258 522 aaKnown RBP15.55■□□□□ 0.08
COL9A3-205ENST00000466192 PRSS44E7EML9 344 aa15.54■□□□□ 0.08
COL9A3-205ENST00000466192 J3QT63 122 aa15.54■□□□□ 0.08
COL9A3-205ENST00000466192 ZNF250P15622 560 aa15.54■□□□□ 0.08
COL9A3-205ENST00000466192 FXYD4P59646 89 aa15.54■□□□□ 0.08
COL9A3-205ENST00000466192 MPV17LQ2QL34 196 aa15.54■□□□□ 0.08
COL9A3-205ENST00000466192 DOLPP1Q86YN1 238 aa15.54■□□□□ 0.08
COL9A3-205ENST00000466192 S100PBPQ96BU1 408 aa15.54■□□□□ 0.08
COL9A3-205ENST00000466192 RAB18Q9NP72 206 aa15.54■□□□□ 0.08
COL9A3-205ENST00000466192 DECR2Q9NUI1 292 aa15.54■□□□□ 0.08
COL9A3-205ENST00000466192 H0YL77 283 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 HOXD4P09016 255 aaPredicted RBP15.53■□□□□ 0.08
COL9A3-205ENST00000466192 SLC25A4P12235 298 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 SELEP16581 610 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 FCGR2CP31995 323 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 FAM169BQ8N8A8 192 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 SCCPDHQ8NBX0 429 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 METTL8Q9H825 291 aaKnown RBP15.53■□□□□ 0.08
COL9A3-205ENST00000466192 TNFSF18Q9UNG2 199 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 ARID1AO14497 2285 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 A0A0B4J2A0 478 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 LRP5LA4QPB2 252 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 IFNA2P01563 188 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 CTSDP07339 412 aaPredicted RBP15.53■□□□□ 0.08
COL9A3-205ENST00000466192 FAM87AP0C7U9 286 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 RAB14P61106 215 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 ALKAL2Q6UX46 152 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 FAM58AQ8N1B3 248 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.53■□□□□ 0.08
COL9A3-205ENST00000466192 THAP6Q8TBB0 222 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 GSX2Q9BZM3 304 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 MBD2Q9UBB5 411 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 SHPKQ9UHJ6 478 aa15.53■□□□□ 0.08
COL9A3-205ENST00000466192 PURGQ9UJV8 347 aaKnown RBP15.53■□□□□ 0.08
COL9A3-205ENST00000466192 ZNF154Q13106 437 aa15.52■□□□□ 0.08
COL9A3-205ENST00000466192 AANATQ16613 207 aa15.52■□□□□ 0.08
COL9A3-205ENST00000466192 BEX5Q5H9J7 111 aa15.52■□□□□ 0.08
COL9A3-205ENST00000466192 TIMM23BQ5SRD1 257 aa15.52■□□□□ 0.08
COL9A3-205ENST00000466192 FAM122CQ6P4D5 195 aa15.52■□□□□ 0.08
COL9A3-205ENST00000466192 UNQ6126/PRO20091Q6UXV3 157 aa15.52■□□□□ 0.08
COL9A3-205ENST00000466192 NEK7Q8TDX7 302 aa15.52■□□□□ 0.08
COL9A3-205ENST00000466192 BCL2L14Q9BZR8 327 aa15.52■□□□□ 0.08
COL9A3-205ENST00000466192 NMES1Q9C002 83 aa15.52■□□□□ 0.08
COL9A3-205ENST00000466192 PLK3Q9H4B4 646 aa15.52■□□□□ 0.08
COL9A3-205ENST00000466192 TINAGQ9UJW2 476 aa15.52■□□□□ 0.08
COL9A3-205ENST00000466192 FZR1Q9UM11 496 aa15.52■□□□□ 0.08
COL9A3-205ENST00000466192 PCNX1Q96RV3 2341 aa15.52■□□□□ 0.08
COL9A3-205ENST00000466192 IGHV3-64DA0A0J9YX35 117 aa15.52■□□□□ 0.07
COL9A3-205ENST00000466192 TEX13DA0A0J9YY54 714 aaPredicted RBP15.52■□□□□ 0.07
COL9A3-205ENST00000466192 TUBAL3A6NHL2 446 aa15.52■□□□□ 0.07
COL9A3-205ENST00000466192 PRRG2O14669 202 aa15.52■□□□□ 0.07
COL9A3-205ENST00000466192 KCNAB3O43448 404 aa15.52■□□□□ 0.07
COL9A3-205ENST00000466192 ZNF728P0DKX0 622 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms