RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 LOXP28300 417 aaPredicted RBP5.09□□□□□ -1.59
CHMP3-206ENST00000466032 GRNP28799 593 aaKnown RBP5.09□□□□□ -1.59
CHMP3-206ENST00000466032 SSTR2P30874 369 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 PRSS3P35030 304 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 FAUP35544 74 aaKnown RBP5.09□□□□□ -1.59
CHMP3-206ENST00000466032 MDH2P40926 338 aaKnown RBP5.09□□□□□ -1.59
CHMP3-206ENST00000466032 OR3A4PP47883 348 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 INPP1P49441 399 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 RBM11P57052 281 aaKnown RBP5.09□□□□□ -1.59
CHMP3-206ENST00000466032 ERVK11-1P61568 191 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 BTG1P62324 171 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 QRFPP83859 136 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 SCN1BQ07699 218 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 MAB21L1Q13394 359 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 ZNF146Q15072 292 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 CDSNQ15517 529 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 SRSF7Q16629 238 aaKnown RBP eCLIP5.09□□□□□ -1.59
CHMP3-206ENST00000466032 IGSF11Q5DX21 431 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 CNIH2Q6PI25 160 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 HAGHLQ6PII5 290 aaPredicted RBP5.09□□□□□ -1.59
CHMP3-206ENST00000466032 TEX261Q6UWH6 196 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 Q6ZR03 302 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 Q6ZTK2 550 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 PEG10Q86TG7 708 aaKnown RBP5.09□□□□□ -1.59
CHMP3-206ENST00000466032 CMTM4Q8IZR5 234 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 STPG2Q8N412 459 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 CLRN3Q8NCR9 226 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 C19orf18Q8NEA5 215 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 OR4D10Q8NGI6 311 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 OR5D13Q8NGL4 314 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 OR10R2Q8NGX6 335 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 SVIPQ8NHG7 77 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 NPRL2Q8WTW4 380 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 FCAMRQ8WWV6 532 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 RAB3CQ96E17 227 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 Q96M66 194 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 C1orf147Q96MC9 270 aaPredicted RBP5.09□□□□□ -1.59
CHMP3-206ENST00000466032 NRIP2Q9BQI9 281 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 C7orf50Q9BRJ6 194 aaKnown RBP5.09□□□□□ -1.59
CHMP3-206ENST00000466032 CHST6Q9GZX3 395 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 SAP30LQ9HAJ7 183 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 HES4Q9HCC6 221 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 MSL2Q9HCI7 577 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 PLEKHJ1Q9NW61 149 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 RNF7Q9UBF6 113 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 RALYQ9UKM9 306 aaKnown RBP5.09□□□□□ -1.59
CHMP3-206ENST00000466032 PPP1R3CQ9UQK1 317 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 ST3GAL6Q9Y274 331 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 U3KQ87 197 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 DOPEY1Q5JWR5 2465 aa5.09□□□□□ -1.59
CHMP3-206ENST00000466032 SPTBN1Q01082 2364 aaKnown RBP5.08□□□□□ -1.6
CHMP3-206ENST00000466032 IGKV1-27A0A075B6S5 117 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 TRAV6A0A075B6T7 132 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 TRAV38-1A0A0B4J264 116 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 A0A1B0GW55 424 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 RPS10-NUDT3A0A1W2PQS6 291 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 SMIM30A4D0T7 59 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 NAP1L6A6NFF2 107 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 MCRIP1C9JLW8 97 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 F5H5P2 479 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 RAB27BO00194 218 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 CDIPTO14735 213 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 SPRY3O43610 288 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 SSX5O60225 188 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 PDCD6O75340 191 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 RBBP9O75884 186 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 EIF4EP06730 217 aaKnown RBP5.08□□□□□ -1.6
CHMP3-206ENST00000466032 LPLP06858 475 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 GRPP07492 148 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 DANCRP0C864 163 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 DUX4L2P0CJ85 424 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 DUX4L3P0CJ86 424 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 DUX4L4P0CJ87 422 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 DUX4L5P0CJ88 424 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 DUX4L6P0CJ89 424 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 DUX4L7P0CJ90 424 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 HIST1H1DP16402 221 aaKnown RBP5.08□□□□□ -1.6
CHMP3-206ENST00000466032 CD33P20138 364 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 ANOS1P23352 680 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 GLRA1P23415 457 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 CDK2P24941 298 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 PAX6P26367 422 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 ARHGDIBP52566 201 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 RAG2P55895 527 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 CLDN12P56749 244 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 PAX5Q02548 391 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 UNC119Q13432 240 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 DYRK1AQ13627 763 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 MICBQ29980 383 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 HFEQ30201 348 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 ALKBH6Q3KRA9 238 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 PYDC2Q56P42 97 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 DNLZQ5SXM8 178 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 TRIQKQ629K1 86 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 SP5Q6BEB4 398 aaPredicted RBP5.08□□□□□ -1.6
CHMP3-206ENST00000466032 WDR82Q6UXN9 313 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 LRP11Q86VZ4 500 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 CALHM1Q8IU99 346 aa5.08□□□□□ -1.6
CHMP3-206ENST00000466032 MUC20Q8N307 709 aaPredicted RBP5.08□□□□□ -1.6
CHMP3-206ENST00000466032 Q8N402 240 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms