RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 C18orf12Q96KH6 178 aa16.02■□□□□ 0.16
TSPAN4-210ENST00000464987 SPRR3Q9UBC9 169 aa16.02■□□□□ 0.16
TSPAN4-210ENST00000464987 KLF13Q9Y2Y9 288 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-210ENST00000464987 TMEM218A2RU14 115 aa16.02■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM74A7A6NL05 159 aa16.02■□□□□ 0.15
TSPAN4-210ENST00000464987 DNASE2O00115 360 aaPredicted RBP16.02■□□□□ 0.15
TSPAN4-210ENST00000464987 PHF1O43189 567 aaPredicted RBP16.02■□□□□ 0.15
TSPAN4-210ENST00000464987 TMEM33P57088 247 aa16.02■□□□□ 0.15
TSPAN4-210ENST00000464987 FGF12P61328 243 aa16.02■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM74A3Q4VXF1 159 aa16.02■□□□□ 0.15
TSPAN4-210ENST00000464987 ADAT1Q9BUB4 502 aaKnown RBP16.02■□□□□ 0.15
TSPAN4-210ENST00000464987 RSRP1Q9BUV0 290 aa16.02■□□□□ 0.15
TSPAN4-210ENST00000464987 HRH4Q9H3N8 390 aa16.02■□□□□ 0.15
TSPAN4-210ENST00000464987 RNF122Q9H9V4 155 aa16.02■□□□□ 0.15
TSPAN4-210ENST00000464987 LPAR3Q9UBY5 353 aa16.02■□□□□ 0.15
TSPAN4-210ENST00000464987 CD300LBA8K4G0 201 aa16.01■□□□□ 0.15
TSPAN4-210ENST00000464987 KLRC4-KLRK1H3BQV0 150 aa16.01■□□□□ 0.15
TSPAN4-210ENST00000464987 GPR31O00270 319 aa16.01■□□□□ 0.15
TSPAN4-210ENST00000464987 CST4P01036 141 aa16.01■□□□□ 0.15
TSPAN4-210ENST00000464987 GLP1RP43220 463 aa16.01■□□□□ 0.15
TSPAN4-210ENST00000464987 HERPUD1Q15011 391 aa16.01■□□□□ 0.15
TSPAN4-210ENST00000464987 RNPS1Q15287 305 aaKnown RBP16.01■□□□□ 0.15
TSPAN4-210ENST00000464987 CCDC36Q8IYA8 594 aa16.01■□□□□ 0.15
TSPAN4-210ENST00000464987 ZFP62Q8NB50 900 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-210ENST00000464987 PRR14LQ5THK1 2151 aa16.01■□□□□ 0.15
TSPAN4-210ENST00000464987 GNRHRP30968 328 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 ID4P47928 161 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 HERV-K104P61576 105 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 PMP22Q01453 160 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 SMCO1Q147U7 214 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 SPATA46Q5T0L3 261 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 HAGHLQ6PII5 290 aaPredicted RBP16■□□□□ 0.15
TSPAN4-210ENST00000464987 UQCC3Q6UW78 93 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 MEX3BQ6ZN04 569 aaKnown RBP16■□□□□ 0.15
TSPAN4-210ENST00000464987 ARL11Q969Q4 196 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 WDYHV1Q96HA8 205 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 FER1L6-AS2Q96M78 137 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 SUCNR1Q9BXA5 334 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 ZDHHC8Q9ULC8 765 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 ARR3P36575 388 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 LPAR6P43657 344 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 UCP3P55916 312 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 GUCA2BQ16661 112 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 TMEM268Q5VZI3 342 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 MYPOPQ86VE0 399 aaPredicted RBP16■□□□□ 0.15
TSPAN4-210ENST00000464987 LRTM2Q8N967 370 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 Q9N2K0 584 aa16■□□□□ 0.15
TSPAN4-210ENST00000464987 H7C1Q1 480 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 TOR1AO14656 332 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 ATG12O94817 140 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 NAPSAO96009 420 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 PLP2Q04941 152 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 SRSF6Q13247 344 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 C20orf204Q6ZNR8 217 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 C17orf78Q8N4C9 275 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 SLC35G3Q8N808 338 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 NKX6-2Q9C056 277 aaPredicted RBP15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM96BQ9Y3D0 163 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 DSPP15924 2871 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 DMXL1Q9Y485 3027 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 LAMA5O15230 3695 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 A0A1W2PR80 420 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 TRAPPC2LH3BP13 241 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 TAAR5O14804 337 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 F12P00748 615 aaPredicted RBP15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 PMELP40967 661 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 OR1K1Q8NGR3 316 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 SECTM1Q8WVN6 248 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 SMIM8Q96KF7 97 aa15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 RCC2Q9P258 522 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-210ENST00000464987 IGKV1D-13A0A0B4J2D9 117 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 IGKV1-13P0DP09 117 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 OR2T2Q6IF00 324 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 MDP1Q86V88 176 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 PUSL1Q8N0Z8 303 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 NEK7Q8TDX7 302 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 OR5P3Q8WZ94 311 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 USB1Q9BQ65 265 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 SYT3Q9BQG1 590 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 PARP12Q9H0J9 701 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 TMEM9BQ9NQ34 198 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 MMP26Q9NRE1 261 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 GTF3C1Q12789 2109 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 IGKV1-6A0A0C4DH72 117 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM90A10PA6NDY2 464 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM90A18PA6NE21 464 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM90A16PA6NEW6 464 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM90A20PA6NIJ5 464 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM90A8PA6NJQ4 464 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM90A7PA6NKC0 464 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM90A22PA8MWA6 464 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM90A12PA8MX19 464 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM90A5PA8MXJ8 464 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM90A23PA8MXZ1 464 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 MPPED1O15442 326 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 MED6O75586 246 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 RHBDL1O75783 438 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 WISP2O76076 250 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM90A15PP0C7V4 464 aa15.98■□□□□ 0.15
TSPAN4-210ENST00000464987 FAM90A13PP0C7W8 464 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms