RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ANGPTL6Q8NI99 470 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 MARVELD3Q96A59 401 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 CXorf58Q96LI9 332 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 VRK1Q99986 396 aaPredicted RBP12.39□□□□□ -0.43
COL5A1-205ENST00000464187 ZNF2Q9BSG1 426 aaPredicted RBP12.39□□□□□ -0.43
COL5A1-205ENST00000464187 NMES1Q9C002 83 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 WDR13Q9H1Z4 485 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 RAB18Q9NP72 206 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 POM121CA8CG34 1229 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 BCL2L11O43521 198 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 ADAP1O75689 374 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 NPBWR2P48146 333 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 ZNF83P51522 516 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 UCP2P55851 309 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 SPATA46Q5T0L3 261 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 BRICD5Q6PL45 260 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 ACOT7LQ6ZUV0 252 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 SLC25A26Q70HW3 274 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 THAP6Q8TBB0 222 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 HPSE2Q8WWQ2 592 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 ST8SIA2Q92186 375 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 MICU1Q9BPX6 476 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 OPA3Q9H6K4 179 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 CHMP1AQ9HD42 196 aaPredicted RBP12.39□□□□□ -0.43
COL5A1-205ENST00000464187 C14orf166Q9Y224 244 aaKnown RBP12.39□□□□□ -0.43
COL5A1-205ENST00000464187 PRR14LQ5THK1 2151 aa12.38□□□□□ -0.43
COL5A1-205ENST00000464187 hCG_1807616A0A1W2PRN6 198 aa12.38□□□□□ -0.43
COL5A1-205ENST00000464187 I3L521 148 aa12.38□□□□□ -0.43
COL5A1-205ENST00000464187 PDCD6O75340 191 aa12.38□□□□□ -0.43
COL5A1-205ENST00000464187 RLN2P04090 185 aa12.38□□□□□ -0.43
COL5A1-205ENST00000464187 CHRNB4P30926 498 aa12.38□□□□□ -0.43
COL5A1-205ENST00000464187 ECI1P42126 302 aa12.38□□□□□ -0.43
COL5A1-205ENST00000464187 ADORA2A-AS1P86434 159 aa12.38□□□□□ -0.43
COL5A1-205ENST00000464187 BEX5Q5H9J7 111 aa12.38□□□□□ -0.43
COL5A1-205ENST00000464187 RGS7BPQ6MZT1 257 aaPredicted RBP12.38□□□□□ -0.43
COL5A1-205ENST00000464187 BATF2Q8N1L9 274 aa12.38□□□□□ -0.43
COL5A1-205ENST00000464187 MARS2Q96GW9 593 aaKnown RBP12.38□□□□□ -0.43
COL5A1-205ENST00000464187 CCDC120Q96HB5 630 aa12.38□□□□□ -0.43
COL5A1-205ENST00000464187 USB1Q9BQ65 265 aaKnown RBP12.38□□□□□ -0.43
COL5A1-205ENST00000464187 LIME1Q9H400 295 aa12.38□□□□□ -0.43
COL5A1-205ENST00000464187 COQ3Q9NZJ6 369 aa12.38□□□□□ -0.43
COL5A1-205ENST00000464187 IGHV2OR16-5A0A0B4J2B6 119 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 KANTRA0A1W2PQU2 76 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 MPTX1A8MV57 137 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 M0R1B8 84 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 ATXN7O15265 892 aaPredicted RBP12.37□□□□□ -0.43
COL5A1-205ENST00000464187 CST4P01036 141 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 OR5H8P0DN80 308 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 PSMB6P28072 239 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 ERVS71-1P61550 626 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 PPP1CBP62140 327 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 PDCD1Q15116 288 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 C1QTNF12Q5T7M4 302 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 Q6ZPA2 131 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 ZDHHC23Q8IYP9 409 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 REG4Q9BYZ8 158 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 OR2J1Q9GZK6 312 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 PCDHB16Q9NRJ7 776 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 DECR2Q9NUI1 292 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 NECAP2Q9NVZ3 263 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 FAM221AA4D161 298 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 KNG1P01042 644 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 CTSDP07339 412 aaPredicted RBP12.37□□□□□ -0.43
COL5A1-205ENST00000464187 ZNF250P15622 560 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 BCL3P20749 454 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 GPM6AP51674 278 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 CYCSP99999 105 aaKnown RBP12.37□□□□□ -0.43
COL5A1-205ENST00000464187 NAAAQ02083 359 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 C3orf36Q3SXR2 165 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 UNQ6126/PRO20091Q6UXV3 157 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 Q8NFD4 153 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 OR1J1Q8NGS3 322 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 PRR7Q8TB68 274 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 SLAMF9Q96A28 289 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 MED9Q9NWA0 146 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 IGSF10Q6WRI0 2623 aa12.37□□□□□ -0.43
COL5A1-205ENST00000464187 TRBV6-7A0A0A0MS04 114 aa12.36□□□□□ -0.43
COL5A1-205ENST00000464187 CD300LBA8K4G0 201 aa12.36□□□□□ -0.43
COL5A1-205ENST00000464187 ASCL1P50553 236 aa12.36□□□□□ -0.43
COL5A1-205ENST00000464187 CEACAM21Q3KPI0 293 aa12.36□□□□□ -0.43
COL5A1-205ENST00000464187 SLC22A25Q6T423 547 aa12.36□□□□□ -0.43
COL5A1-205ENST00000464187 FBXW12Q6X9E4 464 aa12.36□□□□□ -0.43
COL5A1-205ENST00000464187 CCDC28AQ8IWP9 274 aa12.36□□□□□ -0.43
COL5A1-205ENST00000464187 BHLHE23Q8NDY6 225 aa12.36□□□□□ -0.43
COL5A1-205ENST00000464187 SLC25A40Q8TBP6 338 aa12.36□□□□□ -0.43
COL5A1-205ENST00000464187 RBPMSQ93062 196 aaKnown RBP12.36□□□□□ -0.43
COL5A1-205ENST00000464187 OR10C1Q96KK4 312 aa12.36□□□□□ -0.43
COL5A1-205ENST00000464187 RNF126Q9BV68 326 aa12.36□□□□□ -0.43
COL5A1-205ENST00000464187 MFSD2BA6NFX1 497 aa12.35□□□□□ -0.43
COL5A1-205ENST00000464187 FAM90A27PA6NNH2 459 aa12.35□□□□□ -0.43
COL5A1-205ENST00000464187 H0YIZ8 118 aa12.35□□□□□ -0.43
COL5A1-205ENST00000464187 KCNAB3O43448 404 aa12.35□□□□□ -0.43
COL5A1-205ENST00000464187 IFNA2P01563 188 aa12.35□□□□□ -0.43
COL5A1-205ENST00000464187 FUT3P21217 361 aa12.35□□□□□ -0.43
COL5A1-205ENST00000464187 HAAOP46952 286 aa12.35□□□□□ -0.43
COL5A1-205ENST00000464187 UQCRFS1P47985 274 aa12.35□□□□□ -0.43
COL5A1-205ENST00000464187 LUMP51884 338 aaPredicted RBP12.35□□□□□ -0.43
COL5A1-205ENST00000464187 TLE1Q04724 770 aa12.35□□□□□ -0.43
COL5A1-205ENST00000464187 OR2T2Q6IF00 324 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms