RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 SRPXP78539 464 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 PSG9Q00887 426 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 ACVR1Q04771 509 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 FOXF1Q12946 379 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 SHBQ15464 509 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 CCL14Q16627 93 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.14□□□□□ -1.91
COL8A1-205ENST00000463753 MSMPQ1L6U9 139 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 TMEM249Q2WGJ8 235 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 C2orf76Q3KRA6 126 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 CT45A2Q5DJT8 189 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 ACTL10Q5JWF8 245 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 PHYHD1Q5SRE7 291 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 FCRL6Q6DN72 434 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 FBXW12Q6X9E4 464 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 GTF2H5Q6ZYL4 71 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 MRGPRGQ86SM5 289 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 TRAPPC6BQ86SZ2 158 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 BAGE3Q86Y29 109 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 BAGE2Q86Y30 109 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 SGPP2Q8IWX5 399 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 SMIM20Q8N5G0 67 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 LINC01555Q8NAE3 123 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 RCBTB1Q8NDN9 531 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 OR6K6Q8NGW6 343 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 C2orf15Q8WU43 125 aaKnown RBP3.14□□□□□ -1.91
COL8A1-205ENST00000463753 PTPMT1Q8WUK0 201 aaPredicted RBP3.14□□□□□ -1.91
COL8A1-205ENST00000463753 KXD1Q9BQD3 176 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 SRSF8Q9BRL6 282 aaKnown RBP3.14□□□□□ -1.91
COL8A1-205ENST00000463753 CHRDL1Q9BU40 450 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 DUSP23Q9BVJ7 150 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 HDAC8Q9BY41 377 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 OR52D1Q9H346 318 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 MMP17Q9ULZ9 603 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 KLHDC2Q9Y2U9 406 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 IGHV1-69-2A0A0G2JMI3 117 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 TRBV7-9A0A0J9YWB2 115 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 A0A1B0GTH9 108 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 CASTOR2A6NHX0 329 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 RIIAD1A6NNX1 92 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 ALG1L2C9J202 215 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 YPEL1O60688 119 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF205O95201 554 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 SEC11BP0C7V7 166 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 IRF1P10914 325 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF708P17019 499 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF20P17024 532 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 AOAHP28039 575 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 CCR2P41597 374 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 MANFP55145 182 aaKnown RBP3.14□□□□□ -1.91
COL8A1-205ENST00000463753 SCAND1P57086 179 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 NANOS3P60323 173 aaKnown RBP3.14□□□□□ -1.91
COL8A1-205ENST00000463753 LTC4SQ16873 150 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 PLPPR5Q32ZL2 321 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 ANKRD55Q3KP44 614 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 MPV17L2Q567V2 206 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 METRNLQ641Q3 311 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 DPY19L4Q7Z388 723 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 MRGPREQ86SM8 312 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 TMEM173Q86WV6 379 aaPredicted RBP3.14□□□□□ -1.91
COL8A1-205ENST00000463753 WFDC3Q8IUB2 231 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.14□□□□□ -1.91
COL8A1-205ENST00000463753 SPEM1Q8N4L4 309 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 OR2I1PQ8NGU4 316 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 OR5AK2Q8NH90 309 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 FAM3DQ96BQ1 224 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 ALG14Q96F25 216 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 C2orf50Q96LR7 162 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 Q96M85 177 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 YPEL2Q96QA6 119 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 RASL10BQ96S79 203 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 RTBDNQ9BSG5 229 aaPredicted RBP3.14□□□□□ -1.91
COL8A1-205ENST00000463753 ABHD6Q9BV23 337 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 CTDSP1Q9GZU7 261 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 FNDC4Q9H6D8 234 aaPredicted RBP3.14□□□□□ -1.91
COL8A1-205ENST00000463753 NRN1Q9NPD7 142 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 CMC2Q9NRP2 79 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 INPP5EQ9NRR6 644 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 GPR27Q9NS67 375 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 STARD5Q9NSY2 213 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 TMEM140Q9NV12 185 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 PLEKHJ1Q9NW61 149 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 EHFQ9NZC4 300 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 FLRT3Q9NZU0 649 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 IKZF2Q9UKS7 526 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 PIN4Q9Y237 131 aaKnown RBP3.14□□□□□ -1.91
COL8A1-205ENST00000463753 RHBDD3Q9Y3P4 386 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 RNF114Q9Y508 228 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 CKAP5Q14008 2032 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 CCDC88CQ9P219 2028 aa3.14□□□□□ -1.91
COL8A1-205ENST00000463753 TRAV27A0A087WT01 109 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 IGLC7A0M8Q6 106 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 TAX1BP3O14907 124 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 SERF1AO75920 110 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 GAPDHP04406 335 aaKnown RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 HSPB1P04792 205 aaKnown RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 KLK1P06870 262 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 ZGLP1P0C6A0 271 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 CD22P20273 847 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms