RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 C1QL2Q7Z5L3 287 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 CD177Q8N6Q3 437 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 KIR3DL3Q8N743 410 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 ZNF565Q8N9K5 539 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 OR13F1Q8NGS4 319 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 FAM3DQ96BQ1 224 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 PCGF1Q9BSM1 259 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 FUNDC2Q9BWH2 189 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 CHST6Q9GZX3 395 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 PPIL3Q9H2H8 161 aaKnown RBP5.29□□□□□ -1.56
SF3B1-206ENST00000462613 PPA2Q9H2U2 334 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 GAL3ST2Q9H3Q3 398 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 GSX1Q9H4S2 264 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-206ENST00000462613 BANF2Q9H503 90 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 IFT22Q9H7X7 185 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 OR6C3Q9NZP0 311 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 RAB22AQ9UL26 194 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 KPTNQ9Y664 436 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 NAV3Q8IVL0 2385 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 MEIKINA0A087WXM9 373 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 A0A0G2JK05 382 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 CCDC160A6NGH7 325 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 C22orf46C9J442 243 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 INAFM1C9JVW0 142 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 M0R1W7 72 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 SLC33A1O00400 549 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-206ENST00000462613 HSPB6O14558 160 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 GEMIN2O14893 280 aaKnown RBP5.28□□□□□ -1.56
SF3B1-206ENST00000462613 ZNF737O75373 536 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 IFNA2P01563 188 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 IL1AP01583 271 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 GLAP06280 429 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 SMIM18P0DKX4 95 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 VSIG8P0DPA2 414 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 SELLP14151 372 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 AMY2BP19961 511 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 FUT3P21217 361 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 FPR2P25090 351 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 ZFP36P26651 326 aaKnown RBP5.28□□□□□ -1.56
SF3B1-206ENST00000462613 SOX6P35712 828 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 SERPINB10P48595 397 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 P2RX3P56373 397 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 BPIFB3P59826 476 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 ERVFRD-1P60508 538 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 LSM3P62310 102 aaKnown RBP5.28□□□□□ -1.56
SF3B1-206ENST00000462613 ARF6P62330 175 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 RPS27AP62979 156 aaKnown RBP5.28□□□□□ -1.56
SF3B1-206ENST00000462613 PAX8Q06710 450 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 KRTAP1-1Q07627 177 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 ATXN7L3Q14CW9 347 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-206ENST00000462613 P2RY14Q15391 338 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 NKAPLQ5M9Q1 402 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 IDNKQ5T6J7 187 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 OR52W1Q6IF63 320 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 RAB12Q6IQ22 244 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 SFXN4Q6P4A7 337 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 TRAT1Q6PIZ9 186 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 CRIP3Q6Q6R5 217 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 RBMS3Q6XE24 437 aaKnown RBP5.28□□□□□ -1.56
SF3B1-206ENST00000462613 C1orf122Q6ZSJ8 110 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 USP43Q70EL4 1123 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 RNF144BQ7Z419 303 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 ANKRD13BQ86YJ7 626 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 OR4M1Q8NGD0 313 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 OR51D1Q8NGF3 324 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 OR56B1Q8NGI3 324 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 C8orf46Q8TAG6 207 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 RAB2BQ8WUD1 216 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 AP3S1Q92572 193 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 YIPF6Q96EC8 236 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 Q96M66 194 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 ZNF714Q96N38 554 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 WDFY2Q96P53 400 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 NKX3-1Q99801 234 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-206ENST00000462613 BCL7BQ9BQE9 202 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 CENPOQ9BU64 300 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 DPCDQ9BVM2 203 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-206ENST00000462613 MS4A7Q9GZW8 240 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-206ENST00000462613 METTL8Q9H825 291 aaKnown RBP5.28□□□□□ -1.56
SF3B1-206ENST00000462613 LIN7BQ9HAP6 207 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 MMP26Q9NRE1 261 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 PLEKHJ1Q9NW61 149 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 IL36RNQ9UBH0 155 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 DAPK2Q9UIK4 370 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 METRNQ9UJH8 293 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 UBE2J1Q9Y385 318 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-206ENST00000462613 PEX16Q9Y5Y5 336 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 ETV7Q9Y603 341 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 LINC00312Q9Y6C7 94 aa5.28□□□□□ -1.56
SF3B1-206ENST00000462613 SONP18583 2426 aaKnown RBP5.27□□□□□ -1.57
SF3B1-206ENST00000462613 ZANQ9Y493 2812 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 TRAV40A0A0B4J280 105 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 A0A1B0GW55 424 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 A0A1W2PP11 408 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 TMEM82A0PJX8 343 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 TMEM30CPA0ZSE6 113 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 ODAMA1E959 279 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 ZNF729A6NN14 1252 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-206ENST00000462613 TMEM14DPA8MWL7 114 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 PSPNO60542 156 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms