RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 SGCDQ92629 289 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 LGALS12Q96DT0 336 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 PELI1Q96FA3 418 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 ANKRD60Q9BZ19 345 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 BARHL1Q9BZE3 327 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 TMEM133Q9H2Q1 129 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 SEBOXQ9HB31 216 aaPredicted RBP7.2□□□□□ -1.26
LDB1-203ENST00000461873 HMG20AQ9NP66 347 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 AMBNQ9NP70 447 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 PAK1IP1Q9NWT1 392 aaPredicted RBP7.2□□□□□ -1.26
LDB1-203ENST00000461873 OR6C3Q9NZP0 311 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 CKLFQ9UBR5 152 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 TCF19Q9Y242 345 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 IGHV2-26A0A0B4J1V2 119 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 LEUTXA8MZ59 168 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 F8VVB4 439 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 F8VWA3 439 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 WIPF1O43516 503 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 XPNPEP2O43895 674 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 ZNF737O75373 536 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 FBXO24O75426 580 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 WBP4O75554 376 aaKnown RBP7.19□□□□□ -1.26
LDB1-203ENST00000461873 OR2H2O95918 312 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 MT-ND2P03891 347 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 NFYBP25208 207 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 VDAC2P45880 294 aaPredicted RBP7.19□□□□□ -1.26
LDB1-203ENST00000461873 MTNR1BP49286 362 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 RAB13P51153 203 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 AESQ08117 197 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 RBM39Q14498 530 aaKnown RBP7.19□□□□□ -1.26
LDB1-203ENST00000461873 KISS1Q15726 138 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 PAN3Q58A45 887 aaKnown RBP7.19□□□□□ -1.26
LDB1-203ENST00000461873 C6orf141Q5SZD1 244 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 ZNF626Q68DY1 528 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 HCP5Q6MZN7 132 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 CCDC144NLQ6NUI1 221 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 LHFPL4Q7Z7J7 247 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 C11orf44Q8N8P7 122 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 SETD9Q8NE22 299 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 OR11H6Q8NGC7 330 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 RHOXF1Q8NHV9 184 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 GPR148Q8TDV2 347 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 APH1BQ8WW43 257 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 SPACA5Q96QH8 159 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 ERVK13-1Q9NX77 482 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 TAS2R3Q9NYW6 316 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 ING4Q9UNL4 249 aa7.19□□□□□ -1.26
LDB1-203ENST00000461873 AMMECR1Q9Y4X0 333 aaPredicted RBP7.19□□□□□ -1.26
LDB1-203ENST00000461873 TMEM82A0PJX8 343 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 VGLL3A8MV65 326 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 PTGES3LE9PB15 166 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 HSPB6O14558 160 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 PSPNO60542 156 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 KDM4BO94953 1096 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 LPLP06858 475 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 CDK2P24941 298 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 PAX6P26367 422 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 DCKP27707 260 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 SOX2P48431 317 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 NANOS3P60323 173 aaKnown RBP7.18□□□□□ -1.26
LDB1-203ENST00000461873 ATXN7L3Q14CW9 347 aaPredicted RBP7.18□□□□□ -1.26
LDB1-203ENST00000461873 NSUN5P1Q3KNT7 163 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 CCDC58Q4VC31 144 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 PDLIM3Q53GG5 364 aaPredicted RBP7.18□□□□□ -1.26
LDB1-203ENST00000461873 RPL22L1Q6P5R6 122 aaKnown RBP7.18□□□□□ -1.26
LDB1-203ENST00000461873 C16orf82Q7Z2V1 217 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 CENPVQ7Z7K6 275 aaPredicted RBP7.18□□□□□ -1.26
LDB1-203ENST00000461873 TMEM219Q86XT9 240 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 OR4F17Q8NGA8 305 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 OR52N4Q8NGI2 321 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 OR51A4Q8NGJ6 313 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 OR52I1Q8NGK6 324 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 NEK7Q8TDX7 302 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 TNFAIP8L1Q8WVP5 186 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 RPEQ96AT9 228 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 OR4F4Q96R69 305 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 OR5M11Q96RB7 305 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 PDCD1LG2Q9BQ51 273 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 METTL9Q9H1A3 318 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 ISG20L2Q9H9L3 353 aaKnown RBP7.18□□□□□ -1.26
LDB1-203ENST00000461873 RAB9BQ9NP90 201 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 DPM3Q9P2X0 92 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 MYRFQ9Y2G1 1151 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 SIGLEC9Q9Y336 463 aa7.18□□□□□ -1.26
LDB1-203ENST00000461873 EXOSC1Q9Y3B2 195 aaKnown RBP7.18□□□□□ -1.26
LDB1-203ENST00000461873 MEIKINA0A087WXM9 373 aa7.17□□□□□ -1.26
LDB1-203ENST00000461873 IGKV1-9A0A0C4DH69 117 aa7.17□□□□□ -1.26
LDB1-203ENST00000461873 A0A0G2JK05 382 aa7.17□□□□□ -1.26
LDB1-203ENST00000461873 ODAMA1E959 279 aa7.17□□□□□ -1.26
LDB1-203ENST00000461873 MEGF11A6BM72 1044 aa7.17□□□□□ -1.26
LDB1-203ENST00000461873 FAM90A8PA6NJQ4 464 aa7.17□□□□□ -1.26
LDB1-203ENST00000461873 OR4C45A6NMZ5 311 aa7.17□□□□□ -1.26
LDB1-203ENST00000461873 ZNF729A6NN14 1252 aaPredicted RBP7.17□□□□□ -1.26
LDB1-203ENST00000461873 ODF3BA8MYP8 253 aa7.17□□□□□ -1.26
LDB1-203ENST00000461873 J3QRE1 110 aa7.17□□□□□ -1.26
LDB1-203ENST00000461873 ZNF780AO75290 641 aaPredicted RBP7.17□□□□□ -1.26
LDB1-203ENST00000461873 ALX3O95076 343 aa7.17□□□□□ -1.26
LDB1-203ENST00000461873 ZFPL1O95159 310 aa7.17□□□□□ -1.26
LDB1-203ENST00000461873 HTR3BO95264 441 aa7.17□□□□□ -1.26
LDB1-203ENST00000461873 FAM106CPP0CH98 169 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms