RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 COMMD9Q9P000 198 aa1.64□□□□□ -2.15
HDAC6-212ENST00000461608 DHCR7Q9UBM7 475 aaKnown RBP1.64□□□□□ -2.15
HDAC6-212ENST00000461608 V9GYY5 206 aaPredicted RBP1.64□□□□□ -2.15
HDAC6-212ENST00000461608 NOS1P29475 1434 aa1.64□□□□□ -2.15
HDAC6-212ENST00000461608 BRWD3Q6RI45 1802 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 DYSFO75923 2080 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 POLR3AO14802 1390 aaPredicted RBP1.63□□□□□ -2.15
HDAC6-212ENST00000461608 PIK3R4Q99570 1358 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 TRAV8-3A0A0A6YYJ7 113 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 A0A1B0GX12 115 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 F8VZ95 297 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 PHYHO14832 338 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 PDCD6O75340 191 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 ENTPD6O75354 484 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 CNMDO75829 334 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 SNAP29O95721 258 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 SOD3P08294 240 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 SLC35E2BP0CK96 405 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 RNASE2P10153 161 aaKnown RBP1.63□□□□□ -2.15
HDAC6-212ENST00000461608 ATF1P18846 271 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 TSPOP30536 169 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 PYCR1P32322 319 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 MAGEA3P43357 314 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 PRDX1Q06830 199 aaKnown RBP1.63□□□□□ -2.15
HDAC6-212ENST00000461608 FAM53BQ14153 422 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 ZBTB6Q15916 424 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 ERICH5Q6P6B1 374 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 DGAT2L6Q6ZPD8 337 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 DPPA2Q7Z7J5 298 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 SPATA24Q86W54 205 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 AMN1Q8IY45 258 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 BPIFB6Q8NFQ5 453 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 OR8S1Q8NH09 359 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 ITLN2Q8WWU7 325 aaPredicted RBP1.63□□□□□ -2.15
HDAC6-212ENST00000461608 FMC1Q96HJ9 113 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 TXNIPQ9H3M7 391 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 TRIM45Q9H8W5 580 aaPredicted RBP1.63□□□□□ -2.15
HDAC6-212ENST00000461608 TMEM38BQ9NVV0 291 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 ENPP5Q9UJA9 477 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 SNX24Q9Y343 169 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 LOXHD1Q8IVV2 1947 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 ABCB11O95342 1321 aa1.63□□□□□ -2.15
HDAC6-212ENST00000461608 SVILO95425 2214 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 KIAA1671Q9BY89 1806 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 IGHV1-45A0A0A0MS14 117 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 TRAV8-2A0A0B4J237 113 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 TMEM213A2RRL7 107 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 SGCEO43556 437 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 CYTH3O43739 400 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 CA2P00918 260 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 IGHG2P01859 326 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 CD5P06127 495 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 GTF2F2P13984 249 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 SYT1P21579 422 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 CNTFRP26992 372 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 ANP32AP39687 249 aaKnown RBP1.62□□□□□ -2.15
HDAC6-212ENST00000461608 CD151P48509 253 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 AQP5P55064 265 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 IL15RAQ13261 267 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 XRCC4Q13426 336 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 EXOC3L4Q17RC7 722 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 PP632Q6XCG6 107 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 Q6ZQT7 251 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 TMEM136Q6ZRR5 245 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 FAM183BPQ6ZVS7 135 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 COMTD1Q86VU5 262 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 TMEM25Q86YD3 366 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 OR2M3Q8NG83 312 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 OR4C13Q8NGP0 309 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 OR2AE1Q8NHA4 323 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 C2orf15Q8WU43 125 aaKnown RBP1.62□□□□□ -2.15
HDAC6-212ENST00000461608 PDCD6IPQ8WUM4 868 aaKnown RBP1.62□□□□□ -2.15
HDAC6-212ENST00000461608 GTF2H4Q92759 462 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 CLDN23Q96B33 292 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 DDIT4LQ96D03 193 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 MRAP2Q96G30 205 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 OLFM3Q96PB7 478 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 TRNT1Q96Q11 434 aaKnown RBP1.62□□□□□ -2.15
HDAC6-212ENST00000461608 OR2V2Q96R30 315 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 TM2D3Q9BRN9 247 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 FAAP24Q9BTP7 215 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 EBPLQ9BY08 206 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 UGT2B28Q9BY64 529 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 ABCG5Q9H222 651 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 POMKQ9H5K3 350 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 IFT46Q9NQC8 304 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 UBAP1Q9NZ09 502 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 POFUT2Q9Y2G5 429 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 ZBED9Q6R2W3 1325 aa1.62□□□□□ -2.15
HDAC6-212ENST00000461608 RPRD2Q5VT52 1461 aaKnown RBP1.62□□□□□ -2.15
HDAC6-212ENST00000461608 TMEM94Q12767 1356 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 IGHV2-26A0A0B4J1V2 119 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 IGKV2-24A0A0C4DH68 120 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 FAM183AA6NL82 134 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 F5H5P2 479 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 TMEM250H0YL14 139 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 M0QXV9 152 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 SULT1C2O00338 296 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 LIN7AO14910 233 aaPredicted RBP1.61□□□□□ -2.15
HDAC6-212ENST00000461608 SLC31A1O15431 190 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms