RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 MRAP2Q96G30 205 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 PGLYRP3Q96LB9 341 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 LINC01587Q99440 93 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 SUCNR1Q9BXA5 334 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 BBS2Q9BXC9 721 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 POMKQ9H5K3 350 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 DHX35Q9H5Z1 703 aaKnown RBP1.8□□□□□ -2.12
VCL-203ENST00000461383 DHCR7Q9UBM7 475 aaKnown RBP1.8□□□□□ -2.12
VCL-203ENST00000461383 FADS3Q9Y5Q0 445 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 URGCP-MRPS24S4R325 110 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 USP42Q9H9J4 1324 aaKnown RBP1.8□□□□□ -2.12
VCL-203ENST00000461383 SEC16AO15027 2179 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 A0A1B0GXF2 115 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 GMNCA6NCL1 334 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 GOLGA6L4A6NEF3 574 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 IQCF5A8MTL0 148 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 LEUTXA8MZ59 168 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 C16orf90A8MZG2 172 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 PFN1P07737 140 aaKnown RBP1.79□□□□□ -2.12
VCL-203ENST00000461383 AKR1C4P17516 323 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 TSPOP30536 169 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 PYCR1P32322 319 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 KDELR2P33947 212 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 ZNF83P51522 516 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 RHOAP61586 193 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 FMODQ06828 376 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 BAXQ07812 192 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 GOLGA7BQ2TAP0 167 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 RBM48Q5RL73 367 aaKnown RBP1.79□□□□□ -2.12
VCL-203ENST00000461383 FAM183BPQ6ZVS7 135 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 OLIG3Q7RTU3 272 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 TMEM144Q7Z5S9 345 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 COMTD1Q86VU5 262 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 OTUD6BQ8N6M0 293 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 GATD1Q8NB37 220 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 OR1P1Q8NH06 330 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 ACTL9Q8TC94 416 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 FAM45AQ8TCE6 357 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 FAAP24Q9BTP7 215 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 ZNF436Q9C0F3 470 aaPredicted RBP1.79□□□□□ -2.12
VCL-203ENST00000461383 FAM60AQ9NP50 221 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 TMEM38BQ9NVV0 291 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 MS4A12Q9NXJ0 267 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 COMMD9Q9P000 198 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 RBM12B-AS1Q9P1G2 102 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 MAP3K19Q56UN5 1328 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 LRPPRCP42704 1394 aaKnown RBP1.79□□□□□ -2.12
VCL-203ENST00000461383 CACNA1DQ01668 2161 aa1.79□□□□□ -2.12
VCL-203ENST00000461383 IGKV1D-17A0A075B6S4 117 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 A0A1B0GX12 115 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 IGLL5B9A064 214 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 F8VZ95 297 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 K7EPK0 472 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 FFAR1O14842 300 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 CETN3O15182 167 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 CYTH3O43739 400 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 YEATS4O95619 227 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 IGKV1-17P01599 117 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 PET100P0DJ07 73 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 PVALBP20472 110 aaPredicted RBP1.78□□□□□ -2.12
VCL-203ENST00000461383 S100A2P29034 98 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 RCVRNP35243 200 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 TMEM249Q2WGJ8 235 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 LINC00303Q3SY05 128 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 KPRPQ5T749 579 aaPredicted RBP1.78□□□□□ -2.12
VCL-203ENST00000461383 PRR9Q5T870 116 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 PDPK2PQ6A1A2 396 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 PAGE2Q7Z2X7 111 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 DPPA2Q7Z7J5 298 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 AMN1Q8IY45 258 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 OR2K2Q8NGT1 345 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 OR8S1Q8NH09 359 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 RORBQ92753 470 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 DDIT4LQ96D03 193 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 FXYD5Q96DB9 178 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 OLFM3Q96PB7 478 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 MFSD1Q9H3U5 465 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 FBXL15Q9H469 300 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 VSIRQ9H7M9 311 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 ZNHIT6Q9NWK9 470 aaKnown RBP1.78□□□□□ -2.12
VCL-203ENST00000461383 MARCOQ9UEW3 520 aaPredicted RBP1.78□□□□□ -2.12
VCL-203ENST00000461383 POMPQ9Y244 141 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 TRAPPC1Q9Y5R8 145 aa1.78□□□□□ -2.12
VCL-203ENST00000461383 PLXNB3Q9ULL4 1909 aa1.78□□□□□ -2.13
VCL-203ENST00000461383 RPRD2Q5VT52 1461 aaKnown RBP1.77□□□□□ -2.13
VCL-203ENST00000461383 A0A1B0GTI1 187 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 MYBPHLA2RUH7 354 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 FAM183AA6NL82 134 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 EFCAB9A8MZ26 197 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 SMLR1H3BR10 107 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 PDCD6O75340 191 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 RD3LP0DJH9 198 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 PTHLHP12272 177 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 GTF2F2P13984 249 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 CELP19835 753 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 ACTR1BP42025 376 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 HSPA13P48723 471 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 PLTPP55058 493 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 OR10A3P58181 314 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 RAB8AP61006 207 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms