RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 ZNF154Q13106 437 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 ZMYND11Q15326 602 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 UBE2V2Q15819 145 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 SRSF7Q16629 238 aaKnown RBP eCLIP6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 ZNF181Q2M3W8 571 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 HFEQ30201 348 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 CEACAM21Q3KPI0 293 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 ASPHD2Q6ICH7 369 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 Q6ZTK2 550 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 Q71RC1 249 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 FAM220AQ7Z4H9 259 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 GCSAMQ8N6F7 178 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 NANOGP1Q8N7R0 232 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 ZNF540Q8NDQ6 660 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 C19orf18Q8NEA5 215 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 OR52N1Q8NH53 320 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 SLC25A28Q96A46 364 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 ADAT3Q96EY9 351 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 CNBD2Q96M20 576 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 MYCBPQ99417 103 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 ZNF184Q99676 751 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 PPIL3Q9H2H8 161 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 VCX3BQ9H321 246 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 OR51I2Q9H344 312 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 DUSP21Q9H596 190 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 TMEM165Q9HC07 324 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 BATF3Q9NR55 127 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 GPR173Q9NS66 373 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 BABAM2Q9NXR7 383 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 ERVK-18Q9QC07 812 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 LSM2Q9Y333 95 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 EXOSC1Q9Y3B2 195 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 MPC1Q9Y5U8 109 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 NPTNQ9Y639 398 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 IGKV1-27A0A075B6S5 117 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 IRGMA1A4Y4 181 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 DHRS7CA6NNS2 312 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 CLDN25C9JDP6 229 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 CDIPTO14735 213 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 SYT7O43581 403 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 DENRO43583 198 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 RHBDL1O75783 438 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 NRASP01111 189 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 CCDC159P0C7I6 412 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 HSPA13P48723 471 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 GPM6AP51674 278 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 RPS11P62280 158 aaKnown RBP eCLIP6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 BTG1P62324 171 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 CDK5R1Q15078 307 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 TMEM244Q5VVB8 128 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 RNLSQ5VYX0 342 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 DMKNQ6E0U4 476 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 WDR82Q6UXN9 313 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 BIVMQ86UB2 503 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 LRRC28Q86X40 367 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 COMMD2Q86X83 199 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 ZFP41Q8N8Y5 198 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 SPERTQ8NA61 448 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 RPL3LQ92901 407 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 FGGYQ96C11 551 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 SEH1LQ96EE3 360 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 RNF170Q96K19 258 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 PGLYRP3Q96LB9 341 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 OR5M11Q96RB7 305 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 CDCA4Q9BXL8 241 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 FAM234AQ9H0X4 552 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 C1orf123Q9NWV4 160 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 IL36RNQ9UBH0 155 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 ENPP5Q9UJA9 477 aa6.63□□□□□ -1.35
ECHDC1-212ENST00000461239 MALRD1Q5VYJ5 2156 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 IGHV4-28A0A0C4DH34 117 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 A0A1B0GVI7 797 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 PQLC2LA1A4F0 135 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 ANKRD61A6NGH8 418 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 ZNF732B4DXR9 585 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 PLPP2O43688 288 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 MTRF1O75570 445 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 FSTL3O95633 263 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 IGHV2-5P01817 119 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 MT-ND2P03891 347 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 UBCP0CG48 685 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 CFHR2P36980 270 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 GBX2P52951 348 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 SEC61A1P61619 476 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 CCDC58Q4VC31 144 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 KRBOX4Q5JUW0 171 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 CLVS2Q5SYC1 327 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 RPL22L1Q6P5R6 122 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 LYPD2Q6UXB3 125 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 TMPRSS11AQ6ZMR5 421 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 RBPMS2Q6ZRY4 209 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 CALHM1Q8IU99 346 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 STX19Q8N4C7 294 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 OR5A2Q8NGI9 324 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 OR13C5Q8NGS8 318 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 OR8S1Q8NH09 359 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 OR5AK2Q8NH90 309 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 ITFG2Q969R8 447 aa6.62□□□□□ -1.35
ECHDC1-212ENST00000461239 TMEM246Q9BRR3 403 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms