RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 BDKRB2P30411 391 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 ZNF93P35789 620 aaPredicted RBP18.67■□□□□ 0.58
PTPN4-208ENST00000460289 PTGFRP43088 359 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 WNT4P56705 351 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 AESQ08117 197 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 RIPK1Q13546 671 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 ASCL4Q6XD76 172 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 ZFP41Q8N8Y5 198 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 Q8NFD4 153 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 OR51T1Q8NGJ9 327 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 CORO2AQ92828 525 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 MALSU1Q96EH3 234 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 PGLYRP3Q96LB9 341 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 NR1H4Q96RI1 486 aaPredicted RBP18.67■□□□□ 0.58
PTPN4-208ENST00000460289 S100A13Q99584 98 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 PPA2Q9H2U2 334 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 GAL3ST2Q9H3Q3 398 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 FKBP14Q9NWM8 211 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 SLC33A1O00400 549 aaPredicted RBP18.66■□□□□ 0.58
PTPN4-208ENST00000460289 GPX5O75715 221 aa18.66■□□□□ 0.58
PTPN4-208ENST00000460289 RPS11P62280 158 aaKnown RBP eCLIP18.66■□□□□ 0.58
PTPN4-208ENST00000460289 DYNC1I2Q13409 638 aaKnown RBP18.66■□□□□ 0.58
PTPN4-208ENST00000460289 DDI2Q5TDH0 399 aa18.66■□□□□ 0.58
PTPN4-208ENST00000460289 ZNF626Q68DY1 528 aa18.66■□□□□ 0.58
PTPN4-208ENST00000460289 NANOGP1Q8N7R0 232 aa18.66■□□□□ 0.58
PTPN4-208ENST00000460289 OR13C5Q8NGS8 318 aa18.66■□□□□ 0.58
PTPN4-208ENST00000460289 LINC01006Q8NI28 216 aa18.66■□□□□ 0.58
PTPN4-208ENST00000460289 FOXRED1Q96CU9 486 aaPredicted RBP18.66■□□□□ 0.58
PTPN4-208ENST00000460289 METTL9Q9H1A3 318 aa18.66■□□□□ 0.58
PTPN4-208ENST00000460289 TAS2R3Q9NYW6 316 aa18.66■□□□□ 0.58
PTPN4-208ENST00000460289 RNF114Q9Y508 228 aa18.66■□□□□ 0.58
PTPN4-208ENST00000460289 ODF3BA8MYP8 253 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 CLPXO76031 633 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 CD1AP06126 327 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 IGFBP3P17936 291 aaPredicted RBP18.65■□□□□ 0.58
PTPN4-208ENST00000460289 GLIPR1P48060 266 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 IL13RA2Q14627 380 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 KRBOX4Q5JUW0 171 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 C6orf141Q5SZD1 244 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 RNLSQ5VYX0 342 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 OR52W1Q6IF63 320 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 Q6ZSV7 163 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 LHFPL4Q7Z7J7 247 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 TMEM133Q9H2Q1 129 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 C16orf95Q9H693 158 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 RAB18Q9NP72 206 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 PCDHB16Q9NRJ7 776 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 PAK1IP1Q9NWT1 392 aaPredicted RBP18.65■□□□□ 0.58
PTPN4-208ENST00000460289 SCN3BQ9NY72 215 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 ING4Q9UNL4 249 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 DSCAML1Q8TD84 2053 aa18.65■□□□□ 0.58
PTPN4-208ENST00000460289 ODAMA1E959 279 aa18.64■□□□□ 0.57
PTPN4-208ENST00000460289 VGLL3A8MV65 326 aa18.64■□□□□ 0.57
PTPN4-208ENST00000460289 TSPAN9O75954 239 aa18.64■□□□□ 0.57
PTPN4-208ENST00000460289 HTR3BO95264 441 aa18.64■□□□□ 0.57
PTPN4-208ENST00000460289 CELP19835 753 aa18.64■□□□□ 0.57
PTPN4-208ENST00000460289 OR3A4PP47883 348 aa18.64■□□□□ 0.57
PTPN4-208ENST00000460289 NRG4Q8WWG1 115 aa18.64■□□□□ 0.57
PTPN4-208ENST00000460289 WFDC12Q8WWY7 111 aa18.64■□□□□ 0.57
PTPN4-208ENST00000460289 MYDGFQ969H8 173 aa18.64■□□□□ 0.57
PTPN4-208ENST00000460289 ORAI1Q96D31 301 aa18.64■□□□□ 0.57
PTPN4-208ENST00000460289 ZNF696Q9H7X3 374 aa18.64■□□□□ 0.57
PTPN4-208ENST00000460289 IL36GQ9NZH8 169 aa18.64■□□□□ 0.57
PTPN4-208ENST00000460289 NBEAL1Q6ZS30 2694 aa18.64■□□□□ 0.57
PTPN4-208ENST00000460289 IGHV2-26A0A0B4J1V2 119 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 ZNF780AO75290 641 aaPredicted RBP18.63■□□□□ 0.57
PTPN4-208ENST00000460289 CDRT1O95170 752 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 CSTBP04080 98 aaKnown RBP18.63■□□□□ 0.57
PTPN4-208ENST00000460289 CDK1P06493 297 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 AQP4P55087 323 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 BDH1Q02338 343 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 LY6EQ16553 131 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 HEPN1Q6WQI6 88 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 OR10K1Q8NGX5 313 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 THRSPQ92748 146 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 OR14A2Q96R54 314 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 ZNF184Q99676 751 aaPredicted RBP18.63■□□□□ 0.57
PTPN4-208ENST00000460289 CLEC7AQ9BXN2 247 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 BARHL1Q9BZE3 327 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 VCX3BQ9H321 246 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 OR6C3Q9NZP0 311 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 FOXJ3Q9UPW0 622 aa18.63■□□□□ 0.57
PTPN4-208ENST00000460289 TRBV5-7A0A0A0MS05 114 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 PNMA8CA0A1B0GUJ8 204 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 PTGES3LE9PB15 166 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 FSTP19883 344 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 PAX6P26367 422 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 ATXN7L3Q14CW9 347 aaPredicted RBP18.62■□□□□ 0.57
PTPN4-208ENST00000460289 SSX2Q16385 188 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 PAN3Q58A45 887 aaKnown RBP18.62■□□□□ 0.57
PTPN4-208ENST00000460289 PRR31Q5SQ13 230 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 MINOS1Q5TGZ0 78 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 LIAT1Q6ZQX7 453 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 RTN4RL2Q86UN3 420 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 ZNF565Q8N9K5 539 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 COQ2Q96H96 371 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 MND1Q9BWT6 205 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 NCOR1P1Q9H4R4 102 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 ABCB10Q9NRK6 738 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 ING3Q9NXR8 418 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms