RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ZNF44P15621 663 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 PPP3R1P63098 170 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 SCN1BQ07699 218 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 ZNF626Q68DY1 528 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 DMKNQ6E0U4 476 aaPredicted RBP13.08□□□□□ -0.32
COL7A1-203ENST00000459756 ASPHD2Q6ICH7 369 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 Q6P435 159 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 Q6ZSV7 163 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 TRAPPC6BQ86SZ2 158 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 SATL1Q86VE3 508 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 ZNF485Q8NCK3 441 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 OR51A2Q8NGJ7 313 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 TNFAIP8L1Q8WVP5 186 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 GHSRQ92847 366 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 TMEM138Q9NPI0 162 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 PLCXD1Q9NUJ7 323 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 SCN3BQ9NY72 215 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 PSORS1C1Q9UIG5 152 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 SESN1Q9Y6P5 492 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 MGAM2Q2M2H8 2515 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 TRGV10A0A0A0MS01 117 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 VGLL3A8MV65 326 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 GABRPO00591 440 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 DEGS1O15121 323 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 TSPAN9O75954 239 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 CLPXO76031 633 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 CSN2P05814 226 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 LHFPL4Q7Z7J7 247 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 CORO2AQ92828 525 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 MALSU1Q96EH3 234 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 PPA2Q9H2U2 334 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 GAL3ST2Q9H3Q3 398 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 RAB18Q9NP72 206 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 TRRAPQ9Y4A5 3859 aa13.07□□□□□ -0.32
COL7A1-203ENST00000459756 SLC33A1O00400 549 aaPredicted RBP13.06□□□□□ -0.32
COL7A1-203ENST00000459756 MYL12BO14950 172 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 PROK1P58294 105 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 TAS2R43P59537 309 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 AESQ08117 197 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 DYNC1I2Q13409 638 aaKnown RBP13.06□□□□□ -0.32
COL7A1-203ENST00000459756 RSU1Q15404 277 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 YIF1BQ5BJH7 314 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 BRICD5Q6PL45 260 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 ASCL4Q6XD76 172 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 LIAT1Q6ZQX7 453 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 Q8NFD4 153 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 SGCDQ92629 289 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 FAM192AQ9GZU8 254 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 TMEM133Q9H2Q1 129 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 Q9H521 79 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 TAS2R3Q9NYW6 316 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 CKLFQ9UBR5 152 aa13.06□□□□□ -0.32
COL7A1-203ENST00000459756 IGHV2-26A0A0B4J1V2 119 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 TRBV5-5A0A0J9YX44 114 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 ODAMA1E959 279 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 PAX6P26367 422 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 C21orf33P30042 268 aaPredicted RBP13.05□□□□□ -0.32
COL7A1-203ENST00000459756 BDKRB2P30411 391 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 ZNF93P35789 620 aaPredicted RBP13.05□□□□□ -0.32
COL7A1-203ENST00000459756 PTGFRP43088 359 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 GLIPR1P48060 266 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 IL13RA2Q14627 380 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 LY6EQ16553 131 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 Q499Y3 187 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 KRBOX4Q5JUW0 171 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 DDI2Q5TDH0 399 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 MINOS1Q5TGZ0 78 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 OR52W1Q6IF63 320 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 HEPN1Q6WQI6 88 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 OR51T1Q8NGJ9 327 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 PIFOQ8TCI5 191 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 PGLYRP3Q96LB9 341 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 NR1H4Q96RI1 486 aaPredicted RBP13.05□□□□□ -0.32
COL7A1-203ENST00000459756 CITED1Q99966 193 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 CLEC7AQ9BXN2 247 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 CCDC90BQ9GZT6 254 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 PAK1IP1Q9NWT1 392 aaPredicted RBP13.05□□□□□ -0.32
COL7A1-203ENST00000459756 TPRKBQ9Y3C4 175 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 MINOS1-NBL1R4GNA1 71 aa13.05□□□□□ -0.32
COL7A1-203ENST00000459756 GPX5O75715 221 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 OR3A4PP47883 348 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 RPS11P62280 158 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL7A1-203ENST00000459756 SRSF4Q08170 494 aaKnown RBP13.04□□□□□ -0.32
COL7A1-203ENST00000459756 SSX2Q16385 188 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 SLC35E4Q6ICL7 350 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 DYNAPQ8N1N2 210 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 ZFP41Q8N8Y5 198 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 OR4C13Q8NGP0 309 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 OR13C5Q8NGS8 318 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 MYDGFQ969H8 173 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 COQ2Q96H96 371 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 CDCA4Q9BXL8 241 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 ABCB10Q9NRK6 738 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 FKBP14Q9NWM8 211 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 IL36GQ9NZH8 169 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 OR6C3Q9NZP0 311 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 FBLN5Q9UBX5 448 aa13.04□□□□□ -0.32
COL7A1-203ENST00000459756 PNMA8CA0A1B0GUJ8 204 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 MMP23AO75900 390 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 HTR3BO95264 441 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms