RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 MSR1P21757 451 aa16.38■□□□□ 0.21
SEMA3B-208ENST00000456210 RPL23AP62750 156 aaKnown RBP16.38■□□□□ 0.21
SEMA3B-208ENST00000456210 AKR1C8PQ5T2L2 129 aa16.38■□□□□ 0.21
SEMA3B-208ENST00000456210 C17orf82Q86X59 251 aaPredicted RBP16.38■□□□□ 0.21
SEMA3B-208ENST00000456210 ODF3L1Q8IXM7 274 aa16.38■□□□□ 0.21
SEMA3B-208ENST00000456210 ZNF100Q8IYN0 542 aa16.38■□□□□ 0.21
SEMA3B-208ENST00000456210 FAM185AQ8N0U4 392 aa16.38■□□□□ 0.21
SEMA3B-208ENST00000456210 OR5C1Q8NGR4 320 aa16.38■□□□□ 0.21
SEMA3B-208ENST00000456210 RNASEH2CQ8TDP1 164 aaKnown RBP16.38■□□□□ 0.21
SEMA3B-208ENST00000456210 PRO1933Q9H354 126 aa16.38■□□□□ 0.21
SEMA3B-208ENST00000456210 ZNF581Q9P0T4 197 aa16.38■□□□□ 0.21
SEMA3B-208ENST00000456210 SLC7A11Q9UPY5 501 aa16.38■□□□□ 0.21
SEMA3B-208ENST00000456210 TRBV24-1A0A075B6N3 115 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 C3orf85A0A1B0GTC6 90 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 SMCO3A2RU48 225 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 C9J4A7 227 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 F5H5K5 113 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 CLDN34H7C241 214 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 CYB5R3P00387 301 aaPredicted RBP16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 NR2C1P13056 603 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 FOLR1P15328 257 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 MTCP1P56278 107 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 SPCS3P61009 180 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 HIST1H3AP68431 136 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 RSPO1Q2MKA7 263 aaPredicted RBP16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 FAM90A2PQ658T7 463 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 ASCL4Q6XD76 172 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 TMEM56Q96MV1 263 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 TMEM222Q9H0R3 208 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 TP53TG5Q9Y2B4 290 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 TMEM56-RWDD3S4R434 201 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 SEC16AO15027 2179 aa16.37■□□□□ 0.21
SEMA3B-208ENST00000456210 A0A1B0GU03 582 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 DVL1O14640 695 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 MPPED1O15442 326 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 PNLIPP16233 465 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 CD200P41217 278 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 ENDOGQ14249 297 aaKnown RBP16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 JOSD1Q15040 202 aaPredicted RBP16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 OR8B8Q15620 311 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 SSX2Q16385 188 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 MEX3BQ6ZN04 569 aaKnown RBP16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 FOXL2NBQ6ZUU3 175 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 RLN3Q8WXF3 142 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 TPSD1Q9BZJ3 242 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 CDH20Q9HBT6 801 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 RALGAPA1Q6GYQ0 2036 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 CLEC18AA5D8T8 446 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 ONECUT2O95948 504 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 AADACP22760 399 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 NOVA1P51513 510 aaKnown RBP16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 DYNLT3P51808 116 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 RAB4BP61018 213 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 HERV-K104P61576 105 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 EXT1Q16394 746 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 CMTM1Q8IZ96 169 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 CLEC18CQ8NCF0 446 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 SSX3Q99909 188 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 CALHM2Q9HA72 323 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 GPR173Q9NS66 373 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 WNT16Q9UBV4 365 aa16.36■□□□□ 0.21
SEMA3B-208ENST00000456210 A0A1B0GX78 115 aa16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 A0A1W2PNR3 127 aa16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 AQP7P3A6NL99 342 aa16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 GEMIN2O14893 280 aaKnown RBP16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 TLX3O43711 291 aaPredicted RBP16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 ANGPTL7O43827 346 aa16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 SSSCA1O60232 199 aa16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 EPHA1P21709 976 aa16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 OMGP23515 440 aa16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 VAMP2P63027 116 aa16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 FOXO1Q12778 655 aa16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 C10orf128Q5T292 105 aa16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 FIP1L1Q6UN15 594 aaKnown RBP16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 KLRF1Q9NZS2 232 aa16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 DKKL1Q9UK85 242 aa16.35■□□□□ 0.21
SEMA3B-208ENST00000456210 IGHV1OR15-9A0A0B4J2B8 117 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 IGHV3-20A0A0C4DH32 117 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 FGF7P21781 194 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 TAS2R30P59541 319 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 H3F3AP84243 136 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 ZXDAP98168 799 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 TMEM183AQ8IXX5 376 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 DYRK2Q92630 601 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 NOL4LQ96MY1 436 aaPredicted RBP16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 PLSCR2Q9NRY7 297 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 CISD1Q9NZ45 108 aaKnown RBP16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 MRPS17Q9Y2R5 130 aaKnown RBP16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 DUXBA0A1W2PPF3 345 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 M0R135 149 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 SPRY1O43609 319 aaPredicted RBP16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 PPYP01298 95 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 FUT3P21217 361 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 PTGDSP41222 190 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 RUNX1Q01196 453 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 C1orf189Q5VU69 101 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 CPEB2Q7Z5Q1 589 aaKnown RBP16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 NFAM1Q8NET5 270 aaPredicted RBP16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 NABP1Q96AH0 204 aa16.34■□□□□ 0.21
SEMA3B-208ENST00000456210 MISP3Q96FF7 219 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms