RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 YPEL2Q96QA6 119 aa6.67□□□□□ -1.34
HDAC9-218ENST00000456174 TBX15Q96SF7 602 aa6.67□□□□□ -1.34
HDAC9-218ENST00000456174 CMKLR1Q99788 373 aa6.67□□□□□ -1.34
HDAC9-218ENST00000456174 KLHDC3Q9BQ90 382 aa6.67□□□□□ -1.34
HDAC9-218ENST00000456174 NXT1Q9UKK6 140 aaKnown RBP6.67□□□□□ -1.34
HDAC9-218ENST00000456174 RAB22AQ9UL26 194 aa6.67□□□□□ -1.34
HDAC9-218ENST00000456174 ST3GAL6Q9Y274 331 aa6.67□□□□□ -1.34
HDAC9-218ENST00000456174 TMED7Q9Y3B3 224 aa6.67□□□□□ -1.34
HDAC9-218ENST00000456174 COX11Q9Y6N1 276 aa6.67□□□□□ -1.34
HDAC9-218ENST00000456174 IGKV1D-42A0A075B6H8 117 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 TRBV5-5A0A0J9YX44 114 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 RBFOX3A6NFN3 312 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 CDX4O14627 284 aaPredicted RBP6.66□□□□□ -1.34
HDAC9-218ENST00000456174 WDR1O75083 606 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 VAMP5O95183 116 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 SYNGR4O95473 234 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 NUDT14O95848 222 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 CD59P13987 128 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 SERPINA2P20848 420 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 GGTLC2Q14390 218 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 FBLN7Q53RD9 439 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 STPG4Q8N801 248 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 ZNF738Q8NE65 137 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 NIPSNAP3BQ9BS92 247 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 OR11A1Q9GZK7 315 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 ELL3Q9HB65 397 aaPredicted RBP6.66□□□□□ -1.34
HDAC9-218ENST00000456174 PTRH2Q9Y3E5 179 aaKnown RBP6.66□□□□□ -1.34
HDAC9-218ENST00000456174 RNF115Q9Y4L5 304 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 CPAMD8Q8IZJ3 1885 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 TRBV5-7A0A0A0MS05 114 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 RIIAD1A6NNX1 92 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 C9orf172C9J069 976 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 K7N7A8 449 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 ZFAND5O76080 213 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 NDUFB2O95178 105 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 HSPB1P04792 205 aaKnown RBP6.66□□□□□ -1.34
HDAC9-218ENST00000456174 PGCP20142 388 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 KLK2P20151 261 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 ARR3P36575 388 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 PPP1CCP36873 323 aaKnown RBP6.66□□□□□ -1.34
HDAC9-218ENST00000456174 ALDH3B1P43353 468 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 CLDN18P56856 261 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 TMEM33P57088 247 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 FBXW4P57775 412 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 HIST1H3AP68431 136 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 HLA-DRB3P79483 266 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 RAB32Q13637 225 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 P2RY6Q15077 328 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 Q499Y3 187 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 C4orf48Q5BLP8 95 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 DCAF12Q5T6F0 453 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 FAM219AQ8IW50 185 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 ADAD2Q8NCV1 583 aaKnown RBP6.66□□□□□ -1.34
HDAC9-218ENST00000456174 OR4C5Q8NGB2 326 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 OR10G4Q8NGN3 311 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 ZCCHC14Q8WYQ9 949 aaKnown RBP6.66□□□□□ -1.34
HDAC9-218ENST00000456174 AQP3Q92482 292 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 RARRES2Q99969 163 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 MRPL13Q9BYD1 178 aaKnown RBP6.66□□□□□ -1.34
HDAC9-218ENST00000456174 CST9LQ9H4G1 147 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 P4HTMQ9NXG6 502 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 MEMO1Q9Y316 297 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 RBM7Q9Y580 266 aaKnown RBP6.66□□□□□ -1.34
HDAC9-218ENST00000456174 B3GALT1Q9Y5Z6 326 aa6.66□□□□□ -1.34
HDAC9-218ENST00000456174 WDFY3Q8IZQ1 3526 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 IGHV2OR16-5A0A0B4J2B6 119 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 LOC100289279A0A1B0GTE1 492 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 A0A1B0GU03 582 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 KLF7O75840 302 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-218ENST00000456174 STK17BO94768 372 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 GOSR1O95249 250 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 GP1BBP13224 206 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 CEACAM1P13688 526 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 RPL12P30050 165 aaKnown RBP6.65□□□□□ -1.34
HDAC9-218ENST00000456174 FCGR2CP31995 323 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 EGR4Q05215 589 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 PNRC1Q12796 327 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-218ENST00000456174 TMEM183BQ1AE95 376 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 TM4SF20Q53R12 229 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 ZNF506Q5JVG8 444 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 SP5Q6BEB4 398 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-218ENST00000456174 TCF24Q7RTU0 167 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 MDGA2Q7Z553 956 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 OR4D5Q8NGN0 318 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 MCHR2Q969V1 340 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 RNF166Q96A37 237 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-218ENST00000456174 IMMP2LQ96T52 175 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 DEFB126Q9BYW3 111 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 NMNAT2Q9BZQ4 307 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 STRADBQ9C0K7 418 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 CTDSP1Q9GZU7 261 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 PARP12Q9H0J9 701 aaKnown RBP6.65□□□□□ -1.34
HDAC9-218ENST00000456174 ZNF552Q9H707 407 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-218ENST00000456174 FUT9Q9Y231 359 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 LOXL2Q9Y4K0 774 aa6.65□□□□□ -1.34
HDAC9-218ENST00000456174 LOC102723996A0A087X1L8 192 aa6.65□□□□□ -1.35
HDAC9-218ENST00000456174 A0A0A6YYH2 397 aa6.65□□□□□ -1.35
HDAC9-218ENST00000456174 A6NJ64 397 aa6.65□□□□□ -1.35
HDAC9-218ENST00000456174 ZNF705FA8MVS1 300 aaPredicted RBP6.65□□□□□ -1.35
HDAC9-218ENST00000456174 ZNF705DP0CH99 300 aaPredicted RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms