RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 CDX1P47902 265 aaPredicted RBP18.2■□□□□ 0.5
PTPRA-208ENST00000455631 ACTR3P61158 418 aa18.2■□□□□ 0.5
PTPRA-208ENST00000455631 SPATS1Q496A3 300 aa18.2■□□□□ 0.5
PTPRA-208ENST00000455631 C16orf89Q6UX73 402 aa18.2■□□□□ 0.5
PTPRA-208ENST00000455631 HRASLS5Q96KN8 279 aa18.2■□□□□ 0.5
PTPRA-208ENST00000455631 ZMAT4Q9H898 229 aa18.2■□□□□ 0.5
PTPRA-208ENST00000455631 GSTK1Q9Y2Q3 226 aa18.2■□□□□ 0.5
PTPRA-208ENST00000455631 SIRT4Q9Y6E7 314 aaPredicted RBP18.2■□□□□ 0.5
PTPRA-208ENST00000455631 SH2D1BO14796 132 aa18.19■□□□□ 0.5
PTPRA-208ENST00000455631 SYT7O43581 403 aa18.19■□□□□ 0.5
PTPRA-208ENST00000455631 GPR50Q13585 617 aa18.19■□□□□ 0.5
PTPRA-208ENST00000455631 GK3PQ14409 553 aa18.19■□□□□ 0.5
PTPRA-208ENST00000455631 ELAC2Q9BQ52 826 aaKnown RBP18.19■□□□□ 0.5
PTPRA-208ENST00000455631 ZNF729A6NN14 1252 aaPredicted RBP18.18■□□□□ 0.5
PTPRA-208ENST00000455631 RPP14O95059 124 aaKnown RBP18.18■□□□□ 0.5
PTPRA-208ENST00000455631 IGHV3-7P01780 117 aa18.18■□□□□ 0.5
PTPRA-208ENST00000455631 DIAPH2-AS1Q14236 149 aa18.18■□□□□ 0.5
PTPRA-208ENST00000455631 C17orf58Q2M2W7 97 aa18.18■□□□□ 0.5
PTPRA-208ENST00000455631 KRBOX4Q5JUW0 171 aa18.18■□□□□ 0.5
PTPRA-208ENST00000455631 ADAMTSL5Q6ZMM2 481 aa18.18■□□□□ 0.5
PTPRA-208ENST00000455631 KIRREL1Q96J84 757 aa18.18■□□□□ 0.5
PTPRA-208ENST00000455631 CITED4Q96RK1 184 aa18.18■□□□□ 0.5
PTPRA-208ENST00000455631 GON7Q9BXV9 100 aa18.18■□□□□ 0.5
PTPRA-208ENST00000455631 ZNF556Q9HAH1 456 aa18.18■□□□□ 0.5
PTPRA-208ENST00000455631 TVP23BQ9NYZ1 205 aa18.18■□□□□ 0.5
PTPRA-208ENST00000455631 MRM2Q9UI43 246 aaKnown RBP18.18■□□□□ 0.5
PTPRA-208ENST00000455631 SERPINA3P01011 423 aa18.17■□□□□ 0.5
PTPRA-208ENST00000455631 FRMD6-AS1P0C7T7 363 aa18.17■□□□□ 0.5
PTPRA-208ENST00000455631 GPR12P47775 334 aa18.17■□□□□ 0.5
PTPRA-208ENST00000455631 RBP2P50120 134 aa18.17■□□□□ 0.5
PTPRA-208ENST00000455631 ATP1B3P54709 279 aa18.17■□□□□ 0.5
PTPRA-208ENST00000455631 BNIP1Q12981 228 aa18.17■□□□□ 0.5
PTPRA-208ENST00000455631 FOXE3Q13461 319 aa18.17■□□□□ 0.5
PTPRA-208ENST00000455631 MADCAM1Q13477 382 aa18.17■□□□□ 0.5
PTPRA-208ENST00000455631 SLC35F2Q8IXU6 374 aa18.17■□□□□ 0.5
PTPRA-208ENST00000455631 C4orf3Q8WVX3 66 aa18.17■□□□□ 0.5
PTPRA-208ENST00000455631 LEAP2Q969E1 77 aa18.17■□□□□ 0.5
PTPRA-208ENST00000455631 COQ2Q96H96 371 aa18.17■□□□□ 0.5
PTPRA-208ENST00000455631 HMG20AQ9NP66 347 aa18.17■□□□□ 0.5
PTPRA-208ENST00000455631 J3QR06 171 aa18.16■□□□□ 0.5
PTPRA-208ENST00000455631 CST1P01037 141 aa18.16■□□□□ 0.5
PTPRA-208ENST00000455631 ZNF44P15621 663 aa18.16■□□□□ 0.5
PTPRA-208ENST00000455631 RAB7AP51149 207 aa18.16■□□□□ 0.5
PTPRA-208ENST00000455631 SCN1BQ07699 218 aa18.16■□□□□ 0.5
PTPRA-208ENST00000455631 FHL3Q13643 280 aa18.16■□□□□ 0.5
PTPRA-208ENST00000455631 ATXN7L3Q14CW9 347 aaPredicted RBP18.16■□□□□ 0.5
PTPRA-208ENST00000455631 FAM27D1Q5T7N8 215 aa18.16■□□□□ 0.5
PTPRA-208ENST00000455631 TMEM179BQ7Z7N9 219 aa18.16■□□□□ 0.5
PTPRA-208ENST00000455631 OR8H3Q8N146 312 aa18.16■□□□□ 0.5
PTPRA-208ENST00000455631 SLC25A19Q9HC21 320 aa18.16■□□□□ 0.5
PTPRA-208ENST00000455631 NDE1Q9NXR1 346 aa18.16■□□□□ 0.5
PTPRA-208ENST00000455631 SORL1Q92673 2214 aa18.16■□□□□ 0.5
PTPRA-208ENST00000455631 NCBP2LA6PVI3 153 aaKnown RBP18.15■□□□□ 0.5
PTPRA-208ENST00000455631 ZNF670-ZNF695F2Z2N8 137 aa18.15■□□□□ 0.5
PTPRA-208ENST00000455631 CCRL2O00421 344 aa18.15■□□□□ 0.5
PTPRA-208ENST00000455631 ELANEP08246 267 aa18.15■□□□□ 0.5
PTPRA-208ENST00000455631 INSL3P51460 131 aa18.15■□□□□ 0.5
PTPRA-208ENST00000455631 MTCP1P56278 107 aa18.15■□□□□ 0.5
PTPRA-208ENST00000455631 DHFR2Q86XF0 187 aa18.15■□□□□ 0.5
PTPRA-208ENST00000455631 RNF152Q8N8N0 203 aa18.15■□□□□ 0.5
PTPRA-208ENST00000455631 OR11H1Q8NG94 326 aa18.15■□□□□ 0.5
PTPRA-208ENST00000455631 ADI1Q9BV57 179 aa18.15■□□□□ 0.5
PTPRA-208ENST00000455631 PPIL3Q9H2H8 161 aaKnown RBP18.15■□□□□ 0.5
PTPRA-208ENST00000455631 OR6C3Q9NZP0 311 aa18.15■□□□□ 0.5
PTPRA-208ENST00000455631 TAGLN3Q9UI15 199 aa18.15■□□□□ 0.5
PTPRA-208ENST00000455631 KBTBD11-OT1A0A1B0GTJ5 212 aa18.14■□□□□ 0.49
PTPRA-208ENST00000455631 CSN2P05814 226 aa18.14■□□□□ 0.49
PTPRA-208ENST00000455631 GLP1RP43220 463 aa18.14■□□□□ 0.49
PTPRA-208ENST00000455631 GNG10P50151 68 aa18.14■□□□□ 0.49
PTPRA-208ENST00000455631 CATSPERDQ86XM0 798 aa18.14■□□□□ 0.49
PTPRA-208ENST00000455631 HS3ST5Q8IZT8 346 aa18.14■□□□□ 0.49
PTPRA-208ENST00000455631 YIPF7Q8N8F6 280 aa18.14■□□□□ 0.49
PTPRA-208ENST00000455631 DNAAF1Q8NEP3 725 aa18.14■□□□□ 0.49
PTPRA-208ENST00000455631 RNFT2Q96EX2 444 aa18.14■□□□□ 0.49
PTPRA-208ENST00000455631 MNTQ99583 582 aa18.14■□□□□ 0.49
PTPRA-208ENST00000455631 ABCG5Q9H222 651 aa18.14■□□□□ 0.49
PTPRA-208ENST00000455631 ADGRL4Q9HBW9 690 aa18.14■□□□□ 0.49
PTPRA-208ENST00000455631 STARD9Q9P2P6 4700 aa18.14■□□□□ 0.49
PTPRA-208ENST00000455631 GNGT2O14610 69 aa18.13■□□□□ 0.49
PTPRA-208ENST00000455631 RRP9O43818 475 aaKnown RBP18.13■□□□□ 0.49
PTPRA-208ENST00000455631 RAP2AP10114 183 aa18.13■□□□□ 0.49
PTPRA-208ENST00000455631 LTC4SQ16873 150 aa18.13■□□□□ 0.49
PTPRA-208ENST00000455631 TGIF2LXQ8IUE1 241 aa18.13■□□□□ 0.49
PTPRA-208ENST00000455631 RFT1Q96AA3 541 aa18.13■□□□□ 0.49
PTPRA-208ENST00000455631 ISOC1Q96CN7 298 aa18.13■□□□□ 0.49
PTPRA-208ENST00000455631 KRTAP17-1Q9BYP8 105 aa18.13■□□□□ 0.49
PTPRA-208ENST00000455631 COMMD4Q9H0A8 199 aa18.13■□□□□ 0.49
PTPRA-208ENST00000455631 ISYNA1Q9NPH2 558 aa18.13■□□□□ 0.49
PTPRA-208ENST00000455631 LIN7CQ9NUP9 197 aaKnown RBP18.13■□□□□ 0.49
PTPRA-208ENST00000455631 ARL8BQ9NVJ2 186 aa18.13■□□□□ 0.49
PTPRA-208ENST00000455631 PSG11Q9UQ72 335 aa18.13■□□□□ 0.49
PTPRA-208ENST00000455631 KRT8P05787 483 aa18.12■□□□□ 0.49
PTPRA-208ENST00000455631 HCKP08631 526 aa18.12■□□□□ 0.49
PTPRA-208ENST00000455631 BCDIN3DQ7Z5W3 292 aaKnown RBP18.12■□□□□ 0.49
PTPRA-208ENST00000455631 CCDC54Q8NEL0 328 aa18.12■□□□□ 0.49
PTPRA-208ENST00000455631 HAVCR2Q8TDQ0 301 aa18.12■□□□□ 0.49
PTPRA-208ENST00000455631 PP6455Q8WZ26 134 aa18.12■□□□□ 0.49
PTPRA-208ENST00000455631 FAM107BQ9H098 131 aa18.12■□□□□ 0.49
PTPRA-208ENST00000455631 CLN6Q9NWW5 311 aa18.12■□□□□ 0.49
PTPRA-208ENST00000455631 CALYQ9NYX4 217 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms