RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 FAM89BQ8N5H3 189 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 TEX29Q8N6K0 151 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 LY6G5BQ8NDX9 201 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 RAB40AQ8WXH6 277 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 DACT3Q96B18 629 aaPredicted RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 DCTN5Q9BTE1 182 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 NAA50Q9GZZ1 169 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 SHARPINQ9H0F6 387 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 BANF2Q9H503 90 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 HIF1ANQ9NWT6 349 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 NDUFA13Q9P0J0 144 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 RCC2Q9P258 522 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 METRNQ9UJH8 293 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 RPUSD1Q9UJJ7 312 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 ETV7Q9Y603 341 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.85□□□□□ -0.518e-15■■■■□ 21.1
HMGXB4-204ENST00000455359 HIVEP2P31629 2446 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 TRAV24A0A0B4J272 114 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 IGHV2-70DA0A0C4DH43 119 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 SMIM31A0A1B0GVY4 71 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 A0A1B0GW55 424 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 A0A1W2PPH5 198 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 SIRPB1O00241 398 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 PSPNO60542 156 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 FCN3O75636 299 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 CLEC2LP0C7M8 214 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 DUX4L2P0CJ85 424 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 DUX4L3P0CJ86 424 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 DUX4L4P0CJ87 422 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 DUX4L5P0CJ88 424 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 DUX4L6P0CJ89 424 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 DUX4L7P0CJ90 424 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 SELLP14151 372 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 FUT3P21217 361 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 OR3A1P47881 315 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 RORCP51449 518 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 CLDN12P56749 244 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 MEF2CQ06413 473 aaPredicted RBP11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 SCN1BQ07699 218 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 RBM39Q14498 530 aaKnown RBP11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 GRK1Q15835 563 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 PAN3Q58A45 887 aaKnown RBP11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 DUX4L9Q6RFH8 374 aaPredicted RBP11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 FAM46BQ96A09 425 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 NUDT16L1Q9BRJ7 211 aaKnown RBP11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 DPCDQ9BVM2 203 aaPredicted RBP11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 BARHL1Q9BZE3 327 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 LPAR5Q9H1C0 372 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 DCSTAMPQ9H295 470 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 TMEM160Q9NX00 188 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 DUX4Q9UBX2 424 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 KCNS2Q9ULS6 477 aa11.85□□□□□ -0.51
HMGXB4-204ENST00000455359 TMEM272A0A1B0GTI8 110 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 METTL21EPA6NDL7 271 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 C22orf46C9J442 243 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 PDCD6O75340 191 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 CA11O75493 328 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 SCGNO76038 276 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 TFF1P04155 84 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 PPIAL4GP0DN37 164 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 SLC2A2P11168 524 aaPredicted RBP11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 ZNF16P17020 682 aaPredicted RBP11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 TGFBR1P36897 503 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 IDNKQ5T6J7 187 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 DCAF12L2Q5VW00 463 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 OR10K2Q6IF99 312 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 CLEC9AQ6UXN8 241 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 C1orf122Q6ZSJ8 110 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 SUMF2Q8NBJ7 301 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 OR4S1Q8NGB4 309 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 OR56B1Q8NGI3 324 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 ACOT12Q8WYK0 555 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 AP3S1Q92572 193 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 LPAR2Q9HBW0 351 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 INSIG2Q9Y5U4 225 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 CEPT1Q9Y6K0 416 aa11.84□□□□□ -0.51
HMGXB4-204ENST00000455359 ZNF469Q96JG9 3925 aaPredicted RBP11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 hADV38S2A0JD32 116 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 A8MV72 311 aaPredicted RBP11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 MCRIP1C9JLW8 97 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 LY6G6DO95868 133 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 P2RX3P56373 397 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 RPL31P62899 125 aaKnown RBP11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 PAX8Q06710 450 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 ARL6IP1Q15041 203 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 ATAD3CQ5T2N8 411 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 RAB12Q6IQ22 244 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 CMTM4Q8IZR5 234 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 KIR3DL3Q8N743 410 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 H1FXQ92522 213 aaKnown RBP11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 ISOC1Q96CN7 298 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 NEDD4LQ96PU5 975 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 MMP26Q9NRE1 261 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 HSF4Q9ULV5 492 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 SPATA2Q9UM82 520 aa11.83□□□□□ -0.52
HMGXB4-204ENST00000455359 SMIM30A4D0T7 59 aa11.82□□□□□ -0.52
HMGXB4-204ENST00000455359 POM121CA8CG34 1229 aa11.82□□□□□ -0.52
HMGXB4-204ENST00000455359 PDCD1Q15116 288 aa11.82□□□□□ -0.52
HMGXB4-204ENST00000455359 SIGIRRQ6IA17 410 aa11.82□□□□□ -0.52
HMGXB4-204ENST00000455359 CMTM3Q96MX0 182 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms