RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 ARSBP15848 533 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 AMY2BP19961 511 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 SERPINA2P20848 420 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 ERP29P30040 261 aaKnown RBP7.22□□□□□ -1.25
COL28A1-205ENST00000453441 ALDH3B2P48448 385 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 RBM11P57052 281 aaKnown RBP7.22□□□□□ -1.25
COL28A1-205ENST00000453441 PAX5Q02548 391 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 COL10A1Q03692 680 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 SCGB2A2Q13296 93 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 IKZF1Q13422 519 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 SLC22A6Q4U2R8 563 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 DCAF12L2Q5VW00 463 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 MRPL41Q8IXM3 137 aaKnown RBP7.22□□□□□ -1.25
COL28A1-205ENST00000453441 CMTM4Q8IZR5 234 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 OR8H2Q8N162 312 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 CD177Q8N6Q3 437 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 KIR3DL3Q8N743 410 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 ASCC1Q8N9N2 400 aaKnown RBP7.22□□□□□ -1.25
COL28A1-205ENST00000453441 TMEM185AQ8NFB2 350 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 C8orf46Q8TAG6 207 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 ST8SIA4Q92187 359 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 PTX4Q96A99 478 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 SEH1LQ96EE3 360 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 C1orf147Q96MC9 270 aaPredicted RBP7.22□□□□□ -1.25
COL28A1-205ENST00000453441 URM1Q9BTM9 101 aaKnown RBP7.22□□□□□ -1.25
COL28A1-205ENST00000453441 KRTAP4-8Q9BYQ9 185 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 OR51E2Q9H255 320 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 NCOR1P1Q9H4R4 102 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 HIF1ANQ9NWT6 349 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 STEAP1Q9UHE8 339 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 ADAM30Q9UKF2 790 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 ST3GAL6Q9Y274 331 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 AK6Q9Y3D8 172 aaKnown RBP7.22□□□□□ -1.25
COL28A1-205ENST00000453441 INSIG2Q9Y5U4 225 aa7.22□□□□□ -1.25
COL28A1-205ENST00000453441 NSD1Q96L73 2696 aaPredicted RBP7.22□□□□□ -1.25
COL28A1-205ENST00000453441 KIR2DS1A0A191URI9 304 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 hCG_1809904A0A1W2PP81 198 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 A0A1W2PPE2 198 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 A0A1W2PR64 198 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 A0A1W2PRV1 198 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 PHF1O43189 567 aaPredicted RBP7.21□□□□□ -1.26
COL28A1-205ENST00000453441 CA11O75493 328 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 CRTAPO75718 401 aaPredicted RBP7.21□□□□□ -1.26
COL28A1-205ENST00000453441 SCGNO76038 276 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 OR2H2O95918 312 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 IL1AP01583 271 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 TFAP2AP05549 437 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 MGMTP16455 207 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 NDUFB7P17568 137 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 ZFP36P26651 326 aaKnown RBP7.21□□□□□ -1.26
COL28A1-205ENST00000453441 SEC61A1P61619 476 aaKnown RBP7.21□□□□□ -1.26
COL28A1-205ENST00000453441 LCN2P80188 198 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 HOXA4Q00056 320 aaPredicted RBP7.21□□□□□ -1.26
COL28A1-205ENST00000453441 PAX2Q02962 417 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 MEF2CQ06413 473 aaPredicted RBP7.21□□□□□ -1.26
COL28A1-205ENST00000453441 HNRNPA0Q13151 305 aaKnown RBP7.21□□□□□ -1.26
COL28A1-205ENST00000453441 BLMHQ13867 455 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 RBM39Q14498 530 aaKnown RBP7.21□□□□□ -1.26
COL28A1-205ENST00000453441 Q6P435 159 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 C1orf122Q6ZSJ8 110 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 BTN2A1Q7KYR7 527 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 GDPD3Q7L5L3 318 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 RNF144BQ7Z419 303 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 C1QL2Q7Z5L3 287 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 ANKRD13BQ86YJ7 626 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 ZNRF1Q8ND25 227 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 DACT3Q96B18 629 aaPredicted RBP7.21□□□□□ -1.26
COL28A1-205ENST00000453441 NUDT16L1Q9BRJ7 211 aaKnown RBP7.21□□□□□ -1.26
COL28A1-205ENST00000453441 DCTN5Q9BTE1 182 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 FUNDC2Q9BWH2 189 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 TMEM59Q9BXS4 323 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 YAE1D1Q9NRH1 226 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 RPUSD1Q9UJJ7 312 aaKnown RBP7.21□□□□□ -1.26
COL28A1-205ENST00000453441 CDC42EP3Q9UKI2 254 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 KPTNQ9Y664 436 aa7.21□□□□□ -1.26
COL28A1-205ENST00000453441 SONP18583 2426 aaKnown RBP7.21□□□□□ -1.26
COL28A1-205ENST00000453441 A0A0G2JK05 382 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 hADV38S2A0JD32 116 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 TMEM14DPA8MWL7 114 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 M0R1W7 72 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 NOL3O60936 208 aaKnown RBP7.2□□□□□ -1.26
COL28A1-205ENST00000453441 OR7C1O76099 320 aaPredicted RBP7.2□□□□□ -1.26
COL28A1-205ENST00000453441 GABARAPO95166 117 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 RBP4P02753 201 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 PF4P02776 101 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 CALCBP10092 127 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 GABRR1P24046 479 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 SDC2P34741 201 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 BPIFB3P59826 476 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 RPL31P62899 125 aaKnown RBP7.2□□□□□ -1.26
COL28A1-205ENST00000453441 RPS27AP62979 156 aaKnown RBP7.2□□□□□ -1.26
COL28A1-205ENST00000453441 PAX8Q06710 450 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 ARL6IP1Q15041 203 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 GRK1Q15835 563 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 PAN3Q58A45 887 aaKnown RBP7.2□□□□□ -1.26
COL28A1-205ENST00000453441 SFXN4Q6P4A7 337 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 BATF2Q8N1L9 274 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 LY6G5BQ8NDX9 201 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 OR10K1Q8NGX5 313 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 RAB2BQ8WUD1 216 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms