RNA–Protein interactions for RNA: ENST00000452724.1

USP40-209, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-209ENST00000452724 POMKQ9H5K3 350 aa1.56□□□□□ -2.16
USP40-209ENST00000452724 BRD4O60885 1362 aaPredicted RBP1.56□□□□□ -2.16
USP40-209ENST00000452724 ITGB4P16144 1822 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 IGKV1D-37A0A075B6S9 117 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 A0A1B0GXF2 115 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 GSTTP1A0A1W2PQM5 241 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 J3QKU1 62 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 ENSAO43768 121 aaKnown RBP1.55□□□□□ -2.16
USP40-209ENST00000452724 PDYNP01213 254 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 CTLA4P16410 223 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 DEKP35659 375 aaKnown RBP1.55□□□□□ -2.16
USP40-209ENST00000452724 STX4Q12846 297 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 GUSBP1Q15486 140 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 ZNF181Q2M3W8 571 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 C6orf183Q5T699 404 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 PID1Q7Z2X4 250 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 MARCH3Q86UD3 253 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 ASCC1Q8N9N2 400 aaKnown RBP1.55□□□□□ -2.16
USP40-209ENST00000452724 DRAXINQ8NBI3 349 aaPredicted RBP1.55□□□□□ -2.16
USP40-209ENST00000452724 MITD1Q8WV92 249 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 MAL2Q969L2 176 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 KLF6Q99612 283 aaPredicted RBP1.55□□□□□ -2.16
USP40-209ENST00000452724 ULBP1Q9BZM6 244 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 OR5V1Q9UGF6 321 aa1.55□□□□□ -2.16
USP40-209ENST00000452724 CHTOPQ9Y3Y2 248 aaKnown RBP1.55□□□□□ -2.16
USP40-209ENST00000452724 E7EWF7 191 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 MYO1DO94832 1006 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 VAPBO95292 243 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 OPN1SWP03999 348 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 GCLMP48507 274 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 ATP5J2P56134 94 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 CASP8Q14790 479 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 SLC25A25Q6KCM7 469 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 FAHD1Q6P587 224 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 FAM19A1Q7Z5A9 133 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 HS3ST5Q8IZT8 346 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 FAM58AQ8N1B3 248 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 SYS1Q8N2H4 156 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 Q8NDZ9 215 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 OR10D4PQ8NGN7 298 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 OLFM3Q96PB7 478 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 OR8B2Q96RD0 313 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 LINC01587Q99440 93 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 SLC25A31Q9H0C2 315 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 OR2D2Q9H210 308 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 DIABLOQ9NR28 239 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 MRPL16Q9NX20 251 aaKnown RBP1.54□□□□□ -2.16
USP40-209ENST00000452724 STMN3Q9NZ72 180 aa1.54□□□□□ -2.16
USP40-209ENST00000452724 IGHV1-45A0A0A0MS14 117 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 PGPA6NDG6 321 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 G3V3Q6 166 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 H3BP45 60 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 POLR3AO14802 1390 aaPredicted RBP1.53□□□□□ -2.16
USP40-209ENST00000452724 SC5DO75845 299 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 GPR75O95800 540 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 GABRA1P14867 456 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 ZNF22P17026 224 aaPredicted RBP1.53□□□□□ -2.16
USP40-209ENST00000452724 PTNP21246 168 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 BGNP21810 368 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 S100A2P29034 98 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 TTPAP49638 278 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 RAB38P57729 211 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 DSTNP60981 165 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 ADAMTSL3P82987 1691 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 LTBP2Q14767 1821 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 CST6Q15828 149 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 TNXAQ16473 311 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 GOLGA7BQ2TAP0 167 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 ACTL10Q5JWF8 245 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 NXNL2Q5VZ03 156 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 LAIR2Q6ISS4 152 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 MSRB3Q8IXL7 192 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 NELFBQ8WX92 580 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 CDKL2Q92772 493 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 ZNF396Q96N95 335 aaPredicted RBP1.53□□□□□ -2.16
USP40-209ENST00000452724 NAP1L5Q96NT1 182 aaPredicted RBP1.53□□□□□ -2.16
USP40-209ENST00000452724 BIRC8Q96P09 236 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 COPS4Q9BT78 406 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 CYB5R1Q9UHQ9 305 aa1.53□□□□□ -2.16
USP40-209ENST00000452724 BZW2Q9Y6E2 419 aaKnown RBP1.53□□□□□ -2.16
USP40-209ENST00000452724 TRBV24-1A0A075B6N3 115 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 TRAV8-3A0A0A6YYJ7 113 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 OR5H14A6NHG9 310 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 H0YC42 278 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 M0QXV9 152 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 CSTAP01040 98 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 CSRP1P21291 193 aaKnown RBP1.52□□□□□ -2.17
USP40-209ENST00000452724 RANBP1P43487 201 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 RAB25P57735 213 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 PYCR3Q53H96 274 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 OR8G5Q8NG78 346 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 OR8K1Q8NGG5 319 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 OR52K1Q8NGK4 314 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 CIB1Q99828 191 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 TSSK6Q9BXA6 273 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 ZNF337Q9Y3M9 751 aa1.52□□□□□ -2.17
USP40-209ENST00000452724 CACNA1GO43497 2377 aa1.51□□□□□ -2.17
USP40-209ENST00000452724 DOCK6Q96HP0 2047 aa1.51□□□□□ -2.17
USP40-209ENST00000452724 BAHCC1Q9P281 2608 aa1.51□□□□□ -2.17
USP40-209ENST00000452724 TCF21O43680 179 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms