RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 WIPF1O43516 503 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 ALDOBP05062 364 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 ZNF44P15621 663 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 GLIPR1P48060 266 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 RAB13P51153 203 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 AESQ08117 197 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 DYNC1I2Q13409 638 aaKnown RBP15.64■□□□□ 0.09
USP40-207ENST00000450940 LRRC36Q1X8D7 754 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 OR52W1Q6IF63 320 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 CCBE1Q6UXH8 406 aaPredicted RBP15.64■□□□□ 0.09
USP40-207ENST00000450940 ZNF485Q8NCK3 441 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 SETD9Q8NE22 299 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 OR51A2Q8NGJ7 313 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 OR51T1Q8NGJ9 327 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 CYGBQ8WWM9 190 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 COQ2Q96H96 371 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 NPFFR1Q9GZQ6 430 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 GAL3ST2Q9H3Q3 398 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 NCOR1P1Q9H4R4 102 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 SIGLEC9Q9Y336 463 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 EXOSC1Q9Y3B2 195 aaKnown RBP15.64■□□□□ 0.09
USP40-207ENST00000450940 HSPE1-MOB4S4R3N1 261 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 TET2Q6N021 2002 aaPredicted RBP15.63■□□□□ 0.09
USP40-207ENST00000450940 ODAMA1E959 279 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 GABRPO00591 440 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 DEGS1O15121 323 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 CD2P06729 351 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 SOX2P48431 317 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 SCN1BQ07699 218 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 FAM189A2Q15884 450 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 TRAPPC6BQ86SZ2 158 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 Q8N2B8 174 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 DHRSXQ8N5I4 330 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 OR4P4Q8NGL7 312 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 OR52N1Q8NH53 320 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 OR2T6Q8NHC8 308 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 SMIM19Q96E16 107 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 TAS2R4Q9NYW5 299 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 PITPNC1Q9UKF7 332 aa15.63■□□□□ 0.09
USP40-207ENST00000450940 FAM90A22PA8MWA6 464 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 MAGEB3O15480 346 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 LALBAP00709 142 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 CGB3P0DN86 165 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 CGB7P0DN87 165 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 CD34P28906 385 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 BDH1Q02338 343 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 PAX5Q02548 391 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 RCN1Q15293 331 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 RTN4RL2Q86UN3 420 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 ABHD12Q8N2K0 398 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 CFHR4Q92496 578 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 TMEM106AQ96A25 262 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 TMEM80Q96HE8 168 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 ABCB10Q9NRK6 738 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 CLEC2DQ9UHP7 191 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 ZNF281Q9Y2X9 895 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 NOTCH1P46531 2555 aa15.62■□□□□ 0.09
USP40-207ENST00000450940 CASQ2O14958 399 aaPredicted RBP15.61■□□□□ 0.09
USP40-207ENST00000450940 IGLV1-47P01700 117 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 MYL12AP19105 171 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 CDK2P24941 298 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 HTR1DP28221 377 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 IL13RA2Q14627 380 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 HERPUD1Q15011 391 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 PLA1AQ53H76 456 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 KRBOX4Q5JUW0 171 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 PRAMEF5Q5TYX0 476 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 DMKNQ6E0U4 476 aaPredicted RBP15.61■□□□□ 0.09
USP40-207ENST00000450940 TNFAIP8L1Q8WVP5 186 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 GGHQ92820 318 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 GPER1Q99527 375 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 ZNF702PQ9H963 129 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 TMEM138Q9NPI0 162 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 HILPDAQ9Y5L2 63 aa15.61■□□□□ 0.09
USP40-207ENST00000450940 A0A087X0M5 115 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 TRAV24A0A0B4J272 114 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 TRBV5-5A0A0J9YX44 114 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 A0A1B0GX30 115 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 ZNF729A6NN14 1252 aaPredicted RBP15.6■□□□□ 0.09
USP40-207ENST00000450940 GPX5O75715 221 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 GDNFP39905 211 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 PTGFRP43088 359 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 C17orf58Q2M2W7 97 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 NHLRC3Q5JS37 347 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 OGFRL1Q5TC84 451 aaPredicted RBP15.6■□□□□ 0.09
USP40-207ENST00000450940 LAIR2Q6ISS4 152 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 BAIAP2L2Q6UXY1 529 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 SATL1Q86VE3 508 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 ZNF596Q8TC21 504 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 FBLIM1Q8WUP2 373 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 GHSRQ92847 366 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 PPIL3Q9H2H8 161 aaKnown RBP15.6■□□□□ 0.09
USP40-207ENST00000450940 LINC00574Q9H8X3 128 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 SERTAD4Q9NUC0 356 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 IL36GQ9NZH8 169 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 OR6C3Q9NZP0 311 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 DPM3Q9P2X0 92 aa15.6■□□□□ 0.09
USP40-207ENST00000450940 H0YJX3 145 aa15.59■□□□□ 0.09
USP40-207ENST00000450940 KCNAB3O43448 404 aa15.59■□□□□ 0.09
USP40-207ENST00000450940 JUNBP17275 347 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms