RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 SUCNR1Q9BXA5 334 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 SLITRK2Q9H156 845 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 NCOR1P1Q9H4R4 102 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 ZNF696Q9H7X3 374 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 ING4Q9UNL4 249 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 ST3GAL6Q9Y274 331 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 LINC00312Q9Y6C7 94 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 TRAV1-2A0A0B4J238 106 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 TRAV24A0A0B4J272 114 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 IGHV1-69DA0A0B4J2H0 117 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A10PA6NDY2 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A18PA6NE21 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A16PA6NEW6 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A20PA6NIJ5 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A8PA6NJQ4 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A7PA6NKC0 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A22PA8MWA6 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A12PA8MX19 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A5PA8MXJ8 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A23PA8MXZ1 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 DEGS1O15121 323 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 SLC22A1O15245 554 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 TCF21O43680 179 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 IGHV1-69P01742 117 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 CSTBP04080 98 aaKnown RBP11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A15PP0C7V4 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A13PP0C7W8 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A14PP0C7W9 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FAM90A24PP0C7X0 464 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 GTF2F2P13984 249 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 ZNF44P15621 663 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 CFPP27918 469 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 FGF9P31371 208 aaPredicted RBP11.77□□□□□ -0.53
COL3A1-203ENST00000450867 KCNJ3P48549 501 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 HILS1P60008 231 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 MPV17LQ2QL34 196 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 PIGYQ3MUY2 71 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 SLC22A6Q4U2R8 563 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 GLIPR1L1Q6UWM5 242 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 BPIFB2Q8N4F0 458 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 ZNF418Q8TF45 676 aaPredicted RBP11.77□□□□□ -0.53
COL3A1-203ENST00000450867 CORO2AQ92828 525 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 SLC6A7Q99884 636 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 CHST6Q9GZX3 395 aa11.77□□□□□ -0.53
COL3A1-203ENST00000450867 RCC2Q9P258 522 aaKnown RBP11.77□□□□□ -0.53
COL3A1-203ENST00000450867 A0A1W2PP11 408 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 hADV38S2A0JD32 116 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 FUOMA2VDF0 154 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 RNASEK-C17orf49H0YIS7 233 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 ZNF728P0DKX0 622 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 SERPINA2P20848 420 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 CALRP27797 417 aaKnown RBP11.76□□□□□ -0.53
COL3A1-203ENST00000450867 PSMB9P28065 219 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 EDDM3BP56851 147 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 GUCA2AQ02747 115 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 BLMHQ13867 455 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 NCR3LG1Q68D85 454 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 AWAT2Q6E213 333 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 HCP5Q6MZN7 132 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 OR4M1Q8NGD0 313 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 OR6M1Q8NGM8 313 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 LHX4Q969G2 390 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 COQ2Q96H96 371 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 Q96M66 194 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 PPA2Q9H2U2 334 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 SIRT7Q9NRC8 400 aa11.76□□□□□ -0.53
COL3A1-203ENST00000450867 UBE2J1Q9Y385 318 aaPredicted RBP11.76□□□□□ -0.53
COL3A1-203ENST00000450867 A0A087WXM4 84 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 hCG_1809904A0A1W2PP81 198 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 A0A1W2PPE2 198 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 A0A1W2PR64 198 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 A0A1W2PRV1 198 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 SLC17A2O00624 439 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 GEMIN2O14893 280 aaKnown RBP11.75□□□□□ -0.53
COL3A1-203ENST00000450867 MGMTP16455 207 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 CCL3L1P16619 93 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 HTR2CP28335 458 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 UBE2E1P51965 193 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 QRFPP83859 136 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 BRD3OSQ6XYD6 125 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 BCL6BQ8N143 479 aaPredicted RBP11.75□□□□□ -0.53
COL3A1-203ENST00000450867 TMEM104Q8NE00 496 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 ZFAND2BQ8WV99 257 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 SLC25A28Q96A46 364 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 ZNF48Q96MX3 618 aaPredicted RBP11.75□□□□□ -0.53
COL3A1-203ENST00000450867 NR1H4Q96RI1 486 aaPredicted RBP11.75□□□□□ -0.53
COL3A1-203ENST00000450867 MS4A7Q9GZW8 240 aaPredicted RBP11.75□□□□□ -0.53
COL3A1-203ENST00000450867 SPACA1Q9HBV2 294 aa11.75□□□□□ -0.53
COL3A1-203ENST00000450867 STAB1Q9NY15 2570 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 IGHV3OR16-10A0A075B7F0 116 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 SHISA3A0PJX4 238 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 ODAMA1E959 279 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 BPNT1O95861 308 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 GLAP06280 429 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 PSMD7P51665 324 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 SCN1BQ07699 218 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 AESQ08117 197 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 EDDM3AQ14507 147 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 PAN3Q58A45 887 aaKnown RBP11.74□□□□□ -0.53
COL3A1-203ENST00000450867 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms