RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 IL18R1Q13478 541 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 MED21Q13503 144 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 HERPUD1Q15011 391 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 C2orf68Q2NKX9 166 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 KRBOX4Q5JUW0 171 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 SETD9Q8NE22 299 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 TNFAIP8L1Q8WVP5 186 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 NR1H4Q96RI1 486 aaPredicted RBP12.34□□□□□ -0.43
CHD3-205ENST00000449744 FAM192AQ9GZU8 254 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 CHCHD3Q9NX63 227 aaKnown RBP12.34□□□□□ -0.43
CHD3-205ENST00000449744 TAS2R3Q9NYW6 316 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 ODAMA1E959 279 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 F2RL2O00254 374 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 SLC33A1O00400 549 aaPredicted RBP12.33□□□□□ -0.44
CHD3-205ENST00000449744 MMP23AO75900 390 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 CSN2P05814 226 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 CDK2P24941 298 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 HTR1DP28221 377 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 DEFA6Q01524 100 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 ATXN7L3Q14CW9 347 aaPredicted RBP12.33□□□□□ -0.44
CHD3-205ENST00000449744 CDK5R1Q15078 307 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 PRAMEF5Q5TYX0 476 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 OR2G6Q5TZ20 316 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 Q6P435 159 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 RTN4RL2Q86UN3 420 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 ABHD12Q8N2K0 398 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 KLHDC1Q8N7A1 406 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 PACRGLQ8N7B6 248 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 PXT1Q8NFP0 134 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 OR4D6Q8NGJ1 314 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 ZNF596Q8TC21 504 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 CORO2AQ92828 525 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 TAS2R4Q9NYW5 299 aa12.33□□□□□ -0.44
CHD3-205ENST00000449744 EXOSC1Q9Y3B2 195 aaKnown RBP12.33□□□□□ -0.44
CHD3-205ENST00000449744 A6NDX4 124 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 H0YJX3 145 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 GABRPO00591 440 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 CSF1P09603 554 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 VSIG10L2P0DP72 767 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 PTGFRP43088 359 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 DYNLT3P51808 116 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 PPP3R1P63098 170 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 RSU1Q15404 277 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 ARSJQ5FYB0 599 aaPredicted RBP12.32□□□□□ -0.44
CHD3-205ENST00000449744 LDLRAD2Q5SZI1 272 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 XAF1Q6GPH4 301 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 CCBE1Q6UXH8 406 aaPredicted RBP12.32□□□□□ -0.44
CHD3-205ENST00000449744 HEPN1Q6WQI6 88 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 TMEM219Q86XT9 240 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 DHRSXQ8N5I4 330 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 OR51A2Q8NGJ7 313 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 FAM110DQ8TAY7 271 aaPredicted RBP12.32□□□□□ -0.44
CHD3-205ENST00000449744 RGP1Q92546 391 aaPredicted RBP12.32□□□□□ -0.44
CHD3-205ENST00000449744 TMEM106AQ96A25 262 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 TMEM80Q96HE8 168 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 BABAM2Q9NXR7 383 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 OR6C3Q9NZP0 311 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 DIMT1Q9UNQ2 313 aaKnown RBP12.32□□□□□ -0.44
CHD3-205ENST00000449744 FOXJ3Q9UPW0 622 aa12.32□□□□□ -0.44
CHD3-205ENST00000449744 ZNF729A6NN14 1252 aaPredicted RBP12.31□□□□□ -0.44
CHD3-205ENST00000449744 HSPB6O14558 160 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 TOR1AO14656 332 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 PEX14O75381 377 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 HTR3BO95264 441 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 TSPAN15O95858 294 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 ARHGDIBP52566 201 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 IL13RA2Q14627 380 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 RCN1Q15293 331 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 PAN3Q58A45 887 aaKnown RBP12.31□□□□□ -0.44
CHD3-205ENST00000449744 ELP2Q6IA86 826 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 C11orf44Q8N8P7 122 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 SMIM19Q96E16 107 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 COQ2Q96H96 371 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 S100A13Q99584 98 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 BARHL1Q9BZE3 327 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 PRSS22Q9GZN4 317 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 TMEM138Q9NPI0 162 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 DPM3Q9P2X0 92 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 ZNF281Q9Y2X9 895 aa12.31□□□□□ -0.44
CHD3-205ENST00000449744 MEGF8Q7Z7M0 2845 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 FAM172BPA6NC97 362 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 OGG1O15527 345 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 ALDOBP05062 364 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 BRS3P32247 399 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 PRRX1P54821 245 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 BDH1Q02338 343 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 PDLIM3Q53GG5 364 aaPredicted RBP12.3□□□□□ -0.44
CHD3-205ENST00000449744 DDI2Q5TDH0 399 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 ZNF529Q6P280 563 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 BAIAP2L2Q6UXY1 529 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 ZNF565Q8N9K5 539 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 OR4P4Q8NGL7 312 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 OR10K1Q8NGX5 313 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 CREB3L1Q96BA8 519 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 ZNF702PQ9H963 129 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 CLEC2DQ9UHP7 191 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 ING4Q9UNL4 249 aa12.3□□□□□ -0.44
CHD3-205ENST00000449744 TET2Q6N021 2002 aaPredicted RBP12.3□□□□□ -0.44
CHD3-205ENST00000449744 MEIKINA0A087WXM9 373 aa12.29□□□□□ -0.44
CHD3-205ENST00000449744 LEUTXA8MZ59 168 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms