RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 OR52N1Q8NH53 320 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 RPS4Y2Q8TD47 263 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 GGHQ92820 318 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 GHSRQ92847 366 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 AJUBAQ96IF1 538 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 NKX3-1Q99801 234 aaPredicted RBP12.58□□□□□ -0.4
LIMS1-210ENST00000449684 TMEM138Q9NPI0 162 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 ING4Q9UNL4 249 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 MGAM2Q2M2H8 2515 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 IGHV2-26A0A0B4J1V2 119 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 FAM90A8PA6NJQ4 464 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 ODF3BA8MYP8 253 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 H0YJX3 145 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 SLC33A1O00400 549 aaPredicted RBP12.57□□□□□ -0.4
LIMS1-210ENST00000449684 GABRPO00591 440 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 HSPB6O14558 160 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 MYL12BO14950 172 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 OGG1O15527 345 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 HTR3BO95264 441 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 CSTBP04080 98 aaKnown RBP12.57□□□□□ -0.4
LIMS1-210ENST00000449684 CDK2P24941 298 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 GLIPR1P48060 266 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 PROK1P58294 105 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 TAS2R43P59537 309 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 SLC34A1Q06495 639 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 PAN3Q58A45 887 aaKnown RBP12.57□□□□□ -0.4
LIMS1-210ENST00000449684 OGFRL1Q5TC84 451 aaPredicted RBP12.57□□□□□ -0.4
LIMS1-210ENST00000449684 DDI2Q5TDH0 399 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 MINOS1Q5TGZ0 78 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 ASPHD2Q6ICH7 369 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 TCF23Q7RTU1 214 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 BPIFB6Q8NFQ5 453 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 OR4D6Q8NGJ1 314 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 OR10K1Q8NGX5 313 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 OR2T6Q8NHC8 308 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 RGP1Q92546 391 aaPredicted RBP12.57□□□□□ -0.4
LIMS1-210ENST00000449684 CITED1Q99966 193 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 NPFFR1Q9GZQ6 430 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 METTL9Q9H1A3 318 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 TAS2R3Q9NYW6 316 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 PITPNC1Q9UKF7 332 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 HILPDAQ9Y5L2 63 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 MINOS1-NBL1R4GNA1 71 aa12.57□□□□□ -0.4
LIMS1-210ENST00000449684 ODAMA1E959 279 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 F2RL2O00254 374 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 ALDOBP05062 364 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 HTR1DP28221 377 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 BDKRB2P30411 391 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 ZNF93P35789 620 aaPredicted RBP12.56□□□□□ -0.4
LIMS1-210ENST00000449684 PTGFRP43088 359 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 RAB13P51153 203 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 YIF1BQ5BJH7 314 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 PRAMEF5Q5TYX0 476 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 Q6P435 159 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 AHSA2Q719I0 299 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 ABHD12Q8N2K0 398 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 ZFP41Q8N8Y5 198 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 ZNF596Q8TC21 504 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 BARHL1Q9BZE3 327 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 DCLRE1BQ9H816 532 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 PCDHB16Q9NRJ7 776 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 PAK1IP1Q9NWT1 392 aaPredicted RBP12.56□□□□□ -0.4
LIMS1-210ENST00000449684 CNOT2Q9NZN8 540 aaKnown RBP12.56□□□□□ -0.4
LIMS1-210ENST00000449684 OR6C3Q9NZP0 311 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 FBLN5Q9UBX5 448 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 SIRT4Q9Y6E7 314 aaPredicted RBP12.56□□□□□ -0.4
LIMS1-210ENST00000449684 DSCAML1Q8TD84 2053 aa12.56□□□□□ -0.4
LIMS1-210ENST00000449684 PNMA8CA0A1B0GUJ8 204 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 VGLL3A8MV65 326 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 TOR1AO14656 332 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 CASQ2O14958 399 aaPredicted RBP12.55□□□□□ -0.4
LIMS1-210ENST00000449684 XPNPEP2O43895 674 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 CDRT1O95170 752 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 CSN2P05814 226 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 GNAO1P09471 354 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 OR3A4PP47883 348 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 ARHGDIBP52566 201 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 RIPK1Q13546 671 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 IL13RA2Q14627 380 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 Q499Y3 187 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 ARSJQ5FYB0 599 aaPredicted RBP12.55□□□□□ -0.4
LIMS1-210ENST00000449684 ELP2Q6IA86 826 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 ZNF529Q6P280 563 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 CRIP3Q6Q6R5 217 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 RTN4RL2Q86UN3 420 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 DYNAPQ8N1N2 210 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 ZNF565Q8N9K5 539 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 OR13C5Q8NGS8 318 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 CORO2AQ92828 525 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 RANBP3Q9H6Z4 567 aaPredicted RBP12.55□□□□□ -0.4
LIMS1-210ENST00000449684 ST3GAL6Q9Y274 331 aa12.55□□□□□ -0.4
LIMS1-210ENST00000449684 PKD1L1Q8TDX9 2849 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 MEIKINA0A087WXM9 373 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 MMP23AO75900 390 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 LALBAP00709 142 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 C21orf33P30042 268 aaPredicted RBP12.54□□□□□ -0.4
LIMS1-210ENST00000449684 GLP1RP43220 463 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 KIR2DS4P43632 304 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 PRRX1P54821 245 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 KRTAP10-3P60369 221 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms