RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 BGLAPP02818 100 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 LCN2P80188 198 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 ZP2Q05996 745 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 BAXQ07812 192 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 ENDOGQ14249 297 aaKnown RBP16.72■□□□□ 0.27
HMGA1-205ENST00000447654 C16orf82Q7Z2V1 217 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 OR2AJ1Q8NGZ0 328 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 ANAPC16Q96DE5 110 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 ELOVL1Q9BW60 279 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 TMEM106BQ9NUM4 274 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 HRASLS2Q9NWW9 162 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 MRPS28Q9Y2Q9 187 aaKnown RBP16.72■□□□□ 0.27
HMGA1-205ENST00000447654 SPACA6W5XKT8 324 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 SDK1Q7Z5N4 2213 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 MUC3AQ02505 3323 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 H7BYZ3 331 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 MPIG6BO95866 241 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 RPS20P60866 119 aaKnown RBP16.72■□□□□ 0.27
HMGA1-205ENST00000447654 GLIPR1L1Q6UWM5 242 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 OR4D5Q8NGN0 318 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 TMEM37Q8WXS4 190 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 C1orf147Q96MC9 270 aaPredicted RBP16.72■□□□□ 0.27
HMGA1-205ENST00000447654 ZFYVE21Q9BQ24 234 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 ALKBH7Q9BT30 221 aaPredicted RBP16.72■□□□□ 0.27
HMGA1-205ENST00000447654 ST6GALNAC5Q9BVH7 336 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 COL6A3P12111 3177 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 DLL1O00548 723 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 MMP23AO75900 390 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 IGKV1D-16P01601 117 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 H2BFMP0C1H6 154 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 FAM53BQ14153 422 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 LIAT1Q6ZQX7 453 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 LINC01551Q86U37 167 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 LGI3Q8N145 548 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 BAHD1Q8TBE0 780 aaPredicted RBP16.71■□□□□ 0.27
HMGA1-205ENST00000447654 ARHGAP5-AS1Q96IT6 56 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 FAM60AQ9NP50 221 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 SPTY2D1-AS1A0A0U1RR47 76 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 FGF17O60258 216 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 TNFP01375 233 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 DBHP09172 617 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 RTN4RL2Q86UN3 420 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 OR5T1Q8NG75 326 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 DDIT4LQ96D03 193 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 VAMP8Q9BV40 100 aa16.71■□□□□ 0.27
HMGA1-205ENST00000447654 LMX1BO60663 402 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 CDS2O95674 445 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 MMP9P14780 707 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 GZMHP20718 246 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 GNB2P62879 340 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 DEFB110Q30KQ9 67 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 WDR25Q64LD2 544 aaPredicted RBP16.7■□□□□ 0.26
HMGA1-205ENST00000447654 CLEC2AQ6UVW9 174 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 IL22RA1Q8N6P7 574 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 PRSS50Q9UI38 385 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 P2RY10O00398 339 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 IFNA1P01562 189 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 TCN2P20062 427 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 CEACAM8P31997 349 aaPredicted RBP16.7■□□□□ 0.26
HMGA1-205ENST00000447654 EIF3IQ13347 325 aaKnown RBP16.7■□□□□ 0.26
HMGA1-205ENST00000447654 BATFQ16520 125 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 TPTE2P1Q5T6R2 138 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 MARCH3Q86UD3 253 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 TDHQ8IZJ6 230 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 OR2T10Q8NGZ9 312 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 MBD3L1Q8WWY6 194 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 MAGT1Q9H0U3 335 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 OR10A2Q9H208 303 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 GNG13Q9P2W3 67 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 RNF150Q9ULK6 438 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 SLC7A11Q9UPY5 501 aa16.7■□□□□ 0.26
HMGA1-205ENST00000447654 CFAP54Q96N23 3096 aa16.69■□□□□ 0.26
HMGA1-205ENST00000447654 WDR87Q6ZQQ6 2873 aa16.69■□□□□ 0.26
HMGA1-205ENST00000447654 SOX1O00570 391 aaPredicted RBP16.69■□□□□ 0.26
HMGA1-205ENST00000447654 CYR61O00622 381 aa16.69■□□□□ 0.26
HMGA1-205ENST00000447654 TAS2R30P59541 319 aa16.69■□□□□ 0.26
HMGA1-205ENST00000447654 KIAA0895LQ68EN5 471 aa16.69■□□□□ 0.26
HMGA1-205ENST00000447654 TOMM20LQ6UXN7 152 aa16.69■□□□□ 0.26
HMGA1-205ENST00000447654 DEFB119Q8N690 84 aa16.69■□□□□ 0.26
HMGA1-205ENST00000447654 OR52R1Q8NGF1 315 aa16.69■□□□□ 0.26
HMGA1-205ENST00000447654 OR4B1Q8NGF8 309 aa16.69■□□□□ 0.26
HMGA1-205ENST00000447654 ZNF519Q8TB69 540 aa16.69■□□□□ 0.26
HMGA1-205ENST00000447654 SDSLQ96GA7 329 aa16.69■□□□□ 0.26
HMGA1-205ENST00000447654 FOXI3A8MTJ6 420 aaPredicted RBP16.68■□□□□ 0.26
HMGA1-205ENST00000447654 NDUFS8O00217 210 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 FOXS1O43638 330 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 IGFBP4P22692 258 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 CARD18P57730 90 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 UBE2G2P60604 165 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 RPL27P61353 136 aaKnown RBP16.68■□□□□ 0.26
HMGA1-205ENST00000447654 EGR4Q05215 589 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 BSXQ3C1V8 233 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 MORN2Q502X0 79 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 MRGPRGQ86SM5 289 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 ADAT3Q96EY9 351 aaPredicted RBP16.68■□□□□ 0.26
HMGA1-205ENST00000447654 GPR27Q9NS67 375 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 A0A0U1RQV5 110 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 SLC16A7O60669 478 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 IGLV3-19P01714 112 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 CT62P0C5K7 136 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms