RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 LRRTM1Q86UE6 522 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 OR4M1Q8NGD0 313 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 OR10K1Q8NGX5 313 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 ZFAND2BQ8WV99 257 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 TNFRSF14Q92956 283 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 LHX4Q969G2 390 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 MUL1Q969V5 352 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 CHST6Q9GZX3 395 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 PPIL3Q9H2H8 161 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 PRDM13Q9H4Q3 707 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 ST3GAL6Q9Y274 331 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 LINC00312Q9Y6C7 94 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 C17orf98A8MV24 154 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 CCRL2O00421 344 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 UBBP0CG47 229 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 ZNF728P0DKX0 622 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 SERPINA2P20848 420 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 RANBP1P43487 201 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 FABP5Q01469 135 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 PAX5Q02548 391 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 SCN1BQ07699 218 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 ZNF273Q14593 569 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 SLC22A6Q4U2R8 563 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 C1orf100Q5SVJ3 147 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 GLIPR1L1Q6UWM5 242 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 RBMS3Q6XE24 437 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 C11orf42Q8N5U0 333 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 OR4D6Q8NGJ1 314 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 TMEM158Q8WZ71 300 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 C1orf147Q96MC9 270 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 NR1H4Q96RI1 486 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 NKX3-1Q99801 234 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 NCOR1P1Q9H4R4 102 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 SIRT7Q9NRC8 400 aa12.33□□□□□ -0.44
CSNK1E-210ENST00000442216 SVEP1Q4LDE5 3571 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 IGHV3OR16-10A0A075B7F0 116 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 TRDV1A0A1B0GX56 115 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 RNASEK-C17orf49H0YIS7 233 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 UBE2E1P51965 193 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 DLX6P56179 175 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 P2RX3P56373 397 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 ERVFRD-1P60508 538 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 EDDM3AQ14507 147 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 PIGYQ3MUY2 71 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 BRD3OSQ6XYD6 125 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 BCL6BQ8N143 479 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 C22orf15Q8WYQ4 148 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 CORO2AQ92828 525 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 ZNF714Q96N38 554 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 PPA2Q9H2U2 334 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 HEXA-AS1Q9H8Q6 139 aa12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 ZMAT3Q9HA38 289 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 UBE2J1Q9Y385 318 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-210ENST00000442216 TRAV24A0A0B4J272 114 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A10PA6NDY2 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A18PA6NE21 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A16PA6NEW6 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A20PA6NIJ5 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A8PA6NJQ4 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A7PA6NKC0 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A22PA8MWA6 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A12PA8MX19 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A5PA8MXJ8 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A23PA8MXZ1 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 H3BUI4 141 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 VENTXO95231 258 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 TNFAIP8O95379 198 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A15PP0C7V4 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A13PP0C7W8 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A14PP0C7W9 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM90A24PP0C7X0 464 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 CCL3L1P16619 93 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 PSMB9P28065 219 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 PSMD7P51665 324 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 PAN3Q58A45 887 aaKnown RBP12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 SYT6Q5T7P8 510 aaPredicted RBP12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 TCF23Q7RTU1 214 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 SIGLECL1Q8N7X8 197 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 ZNF48Q96MX3 618 aaPredicted RBP12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 BARHL1Q9BZE3 327 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 CST11Q9H112 138 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 SPACA1Q9HBV2 294 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 TAS2R3Q9NYW6 316 aa12.31□□□□□ -0.44
CSNK1E-210ENST00000442216 TRAV1-2A0A0B4J238 106 aa12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 A0A1W2PP11 408 aa12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 TRIM77I1YAP6 450 aa12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 GEMIN2O14893 280 aaKnown RBP12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 SLC22A1O15245 554 aa12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 OR7C1O76099 320 aaPredicted RBP12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 CALRP27797 417 aaKnown RBP12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 HTR2CP28335 458 aa12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 AESQ08117 197 aa12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 KRBOX4Q5JUW0 171 aa12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 RUSC1-AS1Q66K80 236 aa12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 OR6M1Q8NGM8 313 aa12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 COQ2Q96H96 371 aa12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 GAL3ST2Q9H3Q3 398 aa12.3□□□□□ -0.44
CSNK1E-210ENST00000442216 TRGV10A0A0A0MS01 117 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 ODAMA1E959 279 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 CLDN34H7C241 214 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms