RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 Q6ZPA2 131 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 KDF1Q8NAX2 398 aaPredicted RBP14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 PBDC1Q9BVG4 233 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 SPACA1Q9HBV2 294 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 PLSCR2Q9NRY7 297 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 C1orf196B1AJZ1 125 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 M0R036 132 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 CDS2O95674 445 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 EDN3P14138 238 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 ZFP36L1Q07352 338 aaKnown RBP14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 WIPI1Q5MNZ9 446 aaPredicted RBP14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 FAM185AQ8N0U4 392 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 SLC39A7Q92504 469 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 HLA-CQ95604 372 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 ADGRG7Q96K78 797 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 SCRT1Q9BWW7 348 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 FAM86C1Q9NVL1 165 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 C7orf77A4D0Y5 90 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 NPBWR2P48146 333 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 EIF2S3LQ2VIR3 472 aaKnown RBP14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 BATF2Q8N1L9 274 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 OR2C3Q8N628 320 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 HPSE2Q8WWQ2 592 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 HIST1H2BAQ96A08 127 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 POM121Q96HA1 1249 aa14.23□□□□□ -0.13
SEMA3B-207ENST00000441915 ZNF587BE7ETH6 402 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 MT-ND4LP03901 98 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 EWSR1Q01844 656 aaKnown RBP eCLIP14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 SPSB4Q96A44 273 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 BOD1Q96IK1 185 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 C1QTNF5Q9BXJ0 243 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 TMEM222Q9H0R3 208 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 DCAF16Q9NXF7 216 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 ZNF44P15621 663 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 DUSP3P51452 185 aaPredicted RBP14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 ZNF266Q14584 549 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 DPPA2Q7Z7J5 298 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 LFNGQ8NES3 379 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 ABHD3Q8WU67 409 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 CPNE4Q96A23 557 aaPredicted RBP14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 PRDM14Q9GZV8 571 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 TUBA4BQ9H853 241 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 KCNJ16Q9NPI9 418 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 UBE2J1Q9Y385 318 aaPredicted RBP14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 NCKAP5O14513 1909 aa14.22□□□□□ -0.13
SEMA3B-207ENST00000441915 ZNF729A6NN14 1252 aaPredicted RBP14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 UMAD1C9J7I0 102 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 RPL36A-HNRNPH2H7BZ11 118 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 IGHEP01854 428 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 MMP7P09237 267 aaPredicted RBP14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 GNRHRP30968 328 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 NKX2-1P43699 371 aaPredicted RBP14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 NOVA1P51513 510 aaKnown RBP14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 SPIN3Q5JUX0 258 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 TMEM182Q6ZP80 229 aaPredicted RBP14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 ZNF695Q8IW36 515 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 IP6K3Q96PC2 410 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 SLC7A10Q9NS82 523 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 FREM2Q5SZK8 3169 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 CCDC163A0A0D9SF12 145 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 NKX2-6A6NCS4 301 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 LRRC3CA6NJW4 275 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 TRDCB7Z8K6 153 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 TK1P04183 234 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 OTX2P32243 289 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 CLDN15P56746 228 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 ZNF124Q15973 351 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 WDR5BQ86VZ2 330 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 SNIP1Q8TAD8 396 aaKnown RBP14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 FAM213BQ8TBF2 198 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 EXTL1Q92935 676 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 SPIN2AQ99865 258 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 SPIN2BQ9BPZ2 258 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 SLC35B3Q9H1N7 401 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 RYDENQ9NUL5 291 aaKnown RBP14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 FBXO7Q9Y3I1 522 aa14.21□□□□□ -0.13
SEMA3B-207ENST00000441915 CYTIPO60759 359 aa14.21□□□□□ -0.14
SEMA3B-207ENST00000441915 IGHV3-9P01782 118 aa14.21□□□□□ -0.14
SEMA3B-207ENST00000441915 ACER2Q5QJU3 275 aa14.21□□□□□ -0.14
SEMA3B-207ENST00000441915 ZNF561Q8N587 486 aa14.21□□□□□ -0.14
SEMA3B-207ENST00000441915 CPEB3Q8NE35 698 aaKnown RBP14.21□□□□□ -0.14
SEMA3B-207ENST00000441915 ZNF845Q96IR2 970 aaPredicted RBP14.21□□□□□ -0.14
SEMA3B-207ENST00000441915 C20orf24Q9BUV8 137 aa14.21□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A10PA6NDY2 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A18PA6NE21 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A16PA6NEW6 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM24AA6NFZ4 105 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A20PA6NIJ5 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A8PA6NJQ4 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A7PA6NKC0 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A22PA8MWA6 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A12PA8MX19 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A5PA8MXJ8 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A23PA8MXZ1 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A15PP0C7V4 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A13PP0C7W8 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A14PP0C7W9 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM90A24PP0C7X0 464 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 GDF1P27539 372 aa14.2□□□□□ -0.14
SEMA3B-207ENST00000441915 ASCL1P50553 236 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms