RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 LIPCP11150 499 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 PPP1CAP62136 330 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 RPL31P62899 125 aaKnown RBP1.84□□□□□ -2.11
VPS41-207ENST00000439468 SLC35B1P78383 322 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 ST3GAL4Q11206 333 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 ATP6V1FQ16864 119 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 CAVIN4Q5BKX8 364 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 PRR9Q5T870 116 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 CPTPQ5TA50 214 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 TBPL2Q6SJ96 375 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 SLC25A29Q8N8R3 303 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 ASCC1Q8N9N2 400 aaKnown RBP1.84□□□□□ -2.11
VPS41-207ENST00000439468 ZNF420Q8TAQ5 688 aaPredicted RBP1.84□□□□□ -2.11
VPS41-207ENST00000439468 HGDQ93099 445 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 BEX2Q9BXY8 128 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 GAL3ST2Q9H3Q3 398 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 SND1-IT1Q9HBX3 110 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 CSNK1G1Q9HCP0 422 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 FLVCR2Q9UPI3 526 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 ENPP4Q9Y6X5 453 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 KALRNO60229 2985 aa1.84□□□□□ -2.12
VPS41-207ENST00000439468 CELSR3Q9NYQ7 3312 aa1.84□□□□□ -2.12
VPS41-207ENST00000439468 MYOM3Q5VTT5 1437 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 PIEZO2Q9H5I5 2752 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 LRRC37AA6NMS7 1700 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 BRWD1Q9NSI6 2320 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 C2CD3Q4AC94 2353 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 PSME4Q14997 1843 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 IGHV3OR16-8A0A075B7F1 116 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 IGHV6-1A0A0B4J1U7 121 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 TRAV8-4A0A0B4J246 113 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 GOLGA8JA6NMD2 632 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 UPK1BO75841 260 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 DHRS3O75911 302 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 IGLV3-19P01714 112 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 P01737 135 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 GOLGA8HP0CJ92 632 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 NELFEP18615 380 aaKnown RBP1.83□□□□□ -2.12
VPS41-207ENST00000439468 PTNP21246 168 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 HTR2CP28335 458 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 MLF1P58340 268 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 GRB2P62993 217 aaKnown RBP1.83□□□□□ -2.12
VPS41-207ENST00000439468 FAM53BQ14153 422 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 NKAIN1Q4KMZ8 207 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 FAM27D1Q5T7N8 215 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 DUPD1Q68J44 220 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 SLC25A25Q6KCM7 469 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 MED27Q6P2C8 311 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 PRSS54Q6PEW0 395 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 PDPNQ86YL7 162 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 ORMDL3Q8N138 153 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 OR2M7Q8NG81 312 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 OR6K6Q8NGW6 343 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 OR1S1Q8NH92 325 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 RNF170Q96K19 258 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 UTP23Q9BRU9 249 aaKnown RBP1.83□□□□□ -2.12
VPS41-207ENST00000439468 MS4A8Q9BY19 250 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 TDRD3Q9H7E2 651 aaKnown RBP1.83□□□□□ -2.12
VPS41-207ENST00000439468 FANCEQ9HB96 536 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 DDIT4Q9NX09 232 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 RWDD2AQ9UIY3 292 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 UBR5O95071 2799 aaPredicted RBP1.83□□□□□ -2.12
VPS41-207ENST00000439468 USP42Q9H9J4 1324 aaKnown RBP1.83□□□□□ -2.12
VPS41-207ENST00000439468 MYO9AB2RTY4 2548 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 DSPP15924 2871 aaKnown RBP1.83□□□□□ -2.12
VPS41-207ENST00000439468 TRIP11Q15643 1979 aa1.83□□□□□ -2.12
VPS41-207ENST00000439468 TRAV8-7A0A075B6U6 113 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 CENPBD1B2RD01 187 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 BOLA2-SMG1P6H3BVE0 249 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 NDUFS5O43920 106 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 SCO1O75880 301 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 SNAI1O95863 264 aaPredicted RBP1.82□□□□□ -2.12
VPS41-207ENST00000439468 MMP7P09237 267 aaPredicted RBP1.82□□□□□ -2.12
VPS41-207ENST00000439468 HOXB8P17481 243 aaPredicted RBP1.82□□□□□ -2.12
VPS41-207ENST00000439468 CARD18P57730 90 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 PSMC5P62195 406 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 IL5RAQ01344 420 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 KDSRQ06136 332 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 DYNC1I2Q13409 638 aaKnown RBP1.82□□□□□ -2.12
VPS41-207ENST00000439468 TAL2Q16559 108 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 HHATQ5VTY9 493 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 C16orf87Q6PH81 154 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 BBS7Q8IWZ6 715 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 LINC00469Q8N7U9 141 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 OR52K1Q8NGK4 314 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 OR5M1Q8NGP8 315 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 OR10Z1Q8NGY1 313 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 OR1P1Q8NH06 330 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 FAM131CQ96AQ9 280 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 SNF8Q96H20 258 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 DERL3Q96Q80 235 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 MAP1LC3CQ9BXW4 147 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 STMN4Q9H169 189 aaPredicted RBP1.82□□□□□ -2.12
VPS41-207ENST00000439468 ANKHQ9HCJ1 492 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 RAB22AQ9UL26 194 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 ORC6Q9Y5N6 252 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 V9GYY9 64 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 FANCMQ8IYD8 2048 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 COL4A1P02462 1669 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 ELP1O95163 1332 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms