RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	SHANK1	Q9Y566	2161 aa		13.81	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	MUC3A	Q02505	3323 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145		A0A096LPE4	126 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145		A0A1W2PPZ6	126 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145		C9JQL5	133 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	CDS2	O95674	445 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	SFTA3	P0C7M3	94 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	DANCR	P0C864	163 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	SPP1	P10451	314 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	RFC3	P40938	356 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	DVL1P1	P54792	670 aa	Predicted RBP	13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	SRY	Q05066	204 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	LPAL2	Q16609	132 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	CDCP2	Q5VXM1	449 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	FBXW12	Q6X9E4	464 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	ZDHHC23	Q8IYP9	409 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	SLC35G3	Q8N808	338 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	SLAMF9	Q96A28	289 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	TMEM56	Q96MV1	263 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	HES7	Q9BYE0	225 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	PRELID3B	Q9Y3B1	194 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	TMEM56-RWDD3	S4R434	201 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	C3orf85	A0A1B0GTC6	90 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	C21orf140	B9A014	251 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	SYNGR4	O95473	234 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	OR8U9	P0C7N5	309 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	JMJD7	P0C870	316 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	GLI4	P10075	376 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	IL32	P24001	234 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	LMO1	P25800	156 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	ID4	P47928	161 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	MPV17L	Q2QL34	196 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	MRPL21	Q7Z2W9	205 aa	Known RBP	13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	COMMD1	Q8N668	190 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	OR8U1	Q8NH10	309 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	POM121L2	Q96KW2	1035 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	HS3ST6	Q96QI5	342 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	USB1	Q9BQ65	265 aa	Known RBP	13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	SCRT1	Q9BWW7	348 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	TTTY12	Q9BZ98	90 aa		13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	RCL1	Q9Y2P8	373 aa	Known RBP	13.8	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	C5orf49	A4QMS7	147 aa		13.79	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	TRDC	B7Z8K6	153 aa		13.79	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145		H7C2Y5	167 aa		13.79	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	TUSC2	O75896	110 aa		13.79	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	HAAO	P46952	286 aa		13.79	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	GPM6A	P51674	278 aa		13.79	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	OR1C1	Q15619	314 aa		13.79	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	CLEC9A	Q6UXN8	241 aa		13.79	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	DPPA2	Q7Z7J5	298 aa		13.79	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	CALHM2	Q9HA72	323 aa		13.79	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	MTCH1	Q9NZJ7	389 aa		13.79	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.79	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	PVALB	P20472	110 aa	Predicted RBP	13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	CD80	P33681	288 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	MPL	P40238	635 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	MAGEA5	P43359	124 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	C9orf135	Q5VTT2	229 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	BATF2	Q8N1L9	274 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	TMEM251	Q8N6I4	163 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	GTF3A	Q92664	365 aa	Known RBP	13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	KIRREL1	Q96J84	757 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	OPA3	Q9H6K4	179 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	FRYL	O94915	3013 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	CCL2	P13500	99 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	ARR3	P36575	388 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	HERPUD1	Q15011	391 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	SWI5	Q1ZZU3	235 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	DCAF10	Q5QP82	559 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	MKX	Q8IYA7	352 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	OR5A2	Q8NGI9	324 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	OR10Z1	Q8NGY1	313 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	APH1A	Q96BI3	265 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	BOD1	Q96IK1	185 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	ABI3	Q9P2A4	366 aa		13.78	□□□□□ -0.2
HLA-DQB2-231	ENST00000435145	NKX2-6	A6NCS4	301 aa		13.77	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	FAM166B	A8MTA8	275 aa		13.77	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ZNF732	B4DXR9	585 aa		13.77	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	AGPAT2	O15120	278 aa		13.77	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	TK1	P04183	234 aa		13.77	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	CCNO	P22674	350 aa		13.77	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	RAB5C	P51148	216 aa		13.77	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	TBC1D26	Q86UD7	250 aa		13.77	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ABHD14B	Q96IU4	210 aa		13.77	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	VPS13A	Q96RL7	3174 aa		13.77	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ARID1A	O14497	2285 aa		13.77	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	TRBV6-6	A0A0A6YYG2	114 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	DUXB	A0A1W2PPF3	345 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	CLEC18A	A5D8T8	446 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	NGF	P01138	241 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SCT	P09683	121 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SNCA	P37840	140 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	NOVA1	P51513	510 aa	Known RBP	13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	MEX3B	Q6ZN04	569 aa	Known RBP	13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	CLEC18C	Q8NCF0	446 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	LUZP4	Q9P127	313 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	IL36RN	Q9UBH0	155 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	CACFD1	Q9UGQ2	172 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	IGKV1-6	A0A0C4DH72	117 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms