RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 DNAJB11Q9UBS4 358 aa10.99□□□□□ -0.65
DDX56-204ENST00000431640 TUBD1Q9UJT1 453 aa10.99□□□□□ -0.65
DDX56-204ENST00000431640 PRRC2CQ9Y520 2896 aaKnown RBP10.98□□□□□ -0.65
DDX56-204ENST00000431640 FREM1Q5H8C1 2179 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 ATRXP46100 2492 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 ZNF407Q9C0G0 2248 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 TLN1Q9Y490 2541 aaKnown RBP10.98□□□□□ -0.65
DDX56-204ENST00000431640 SMG1Q96Q15 3661 aaKnown RBP10.98□□□□□ -0.65
DDX56-204ENST00000431640 KIR2DS1A0A191URI9 304 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 MSTNO14793 375 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 SHOXO15266 292 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 IGHV1-2P23083 117 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 IL32P24001 234 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 KIR2DS4P43632 304 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 PIGPP57054 158 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 HERV-K104P61576 105 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 IL15RAQ13261 267 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 LY6DQ14210 128 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 RBM39Q14498 530 aaKnown RBP10.98□□□□□ -0.65
DDX56-204ENST00000431640 KIR2DS1Q14954 304 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 GUSBP1Q15486 140 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 GABRA6Q16445 453 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 BRICD5Q6PL45 260 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 FAM185AQ8N0U4 392 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 C1orf162Q8NEQ5 155 aaPredicted RBP10.98□□□□□ -0.65
DDX56-204ENST00000431640 LRRC20Q8TCA0 184 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 RBPMSQ93062 196 aaKnown RBP10.98□□□□□ -0.65
DDX56-204ENST00000431640 MOB3AQ96BX8 217 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 RTL8AQ9BWD3 113 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 ZNF471Q9BX82 626 aaPredicted RBP10.98□□□□□ -0.65
DDX56-204ENST00000431640 FGF23Q9GZV9 251 aaPredicted RBP10.98□□□□□ -0.65
DDX56-204ENST00000431640 NAA60Q9H7X0 242 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 ZNF581Q9P0T4 197 aa10.98□□□□□ -0.65
DDX56-204ENST00000431640 TPRP12270 2363 aaKnown RBP10.97□□□□□ -0.65
DDX56-204ENST00000431640 DNAJC13O75165 2243 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 F5H0A9 414 aaPredicted RBP10.97□□□□□ -0.65
DDX56-204ENST00000431640 I3L521 148 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 DIRAS3O95661 229 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 RLN2P04090 185 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 HOXB5P09067 269 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 RAC2P15153 192 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 CBR1P16152 277 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 PPP1CBP62140 327 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 NAAAQ02083 359 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 ATXN7L3Q14CW9 347 aaPredicted RBP10.97□□□□□ -0.65
DDX56-204ENST00000431640 HAGHLQ6PII5 290 aaPredicted RBP10.97□□□□□ -0.65
DDX56-204ENST00000431640 CCDC28AQ8IWP9 274 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 Q8IYB0 196 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 LRTM2Q8N967 370 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 POC1AQ8NBT0 407 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 RTN4IP1Q8WWV3 396 aaPredicted RBP10.97□□□□□ -0.65
DDX56-204ENST00000431640 OR10C1Q96KK4 312 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 RSRP1Q9BUV0 290 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 WDR13Q9H1Z4 485 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 Q9N2K0 584 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 ZFP57Q9NU63 452 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 RASL12Q9NYN1 266 aa10.97□□□□□ -0.65
DDX56-204ENST00000431640 FAM221AA4D161 298 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 NAPSAO96009 420 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 TK1P04183 234 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 PRKACAP17612 351 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 HOXC12P31275 282 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 EIF5AP63241 154 aaKnown RBP10.96□□□□□ -0.65
DDX56-204ENST00000431640 SMCO1Q147U7 214 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 PDCD1Q15116 288 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 TOR2AQ5JU69 321 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 ZNF324BQ6AW86 544 aaPredicted RBP10.96□□□□□ -0.65
DDX56-204ENST00000431640 OR2T2Q6IF00 324 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 FAM58AQ8N1B3 248 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 PCNPQ8WW12 178 aaKnown RBP10.96□□□□□ -0.65
DDX56-204ENST00000431640 DYRK2Q92630 601 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 TOMM40LQ969M1 308 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 OR51I2Q9H344 312 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 LIME1Q9H400 295 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 IFT22Q9H7X7 185 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 PLSCR4Q9NRQ2 329 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 SDHAF2Q9NX18 166 aa10.96□□□□□ -0.65
DDX56-204ENST00000431640 ZNF629Q9UEG4 869 aaPredicted RBP10.96□□□□□ -0.65
DDX56-204ENST00000431640 TRBV6-6A0A0A6YYG2 114 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 LRP5LA4QPB2 252 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 MFSD2BA6NFX1 497 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 TRDCB7Z8K6 153 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 F8VVB4 439 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 F8VWA3 439 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 H7C1Q1 480 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 J3QT63 122 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 TAAR5O14804 337 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 TPT1P13693 172 aaKnown RBP10.95□□□□□ -0.66
DDX56-204ENST00000431640 CA6P23280 308 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 LUMP51884 338 aaPredicted RBP10.95□□□□□ -0.66
DDX56-204ENST00000431640 UCP2P55851 309 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 SRPXP78539 464 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 TMEM187Q14656 261 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 DAZAP2Q15038 168 aaPredicted RBP10.95□□□□□ -0.66
DDX56-204ENST00000431640 IAH1Q2TAA2 248 aaPredicted RBP10.95□□□□□ -0.66
DDX56-204ENST00000431640 PAN3Q58A45 887 aaKnown RBP10.95□□□□□ -0.66
DDX56-204ENST00000431640 BEX5Q5H9J7 111 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 FAM76BQ5HYJ3 339 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 C1orf174Q8IYL3 243 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 BHLHE23Q8NDY6 225 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms