RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 HKR1P10072 659 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 AADACP22760 399 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 RPL12P30050 165 aaKnown RBP11.74□□□□□ -0.53
THBS3-202ENST00000428962 GNG3P63215 75 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 DAZAP2Q15038 168 aaPredicted RBP11.74□□□□□ -0.53
THBS3-202ENST00000428962 TBC1D28Q2M2D7 210 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 HIKESHIQ53FT3 197 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 PHLDA2Q53GA4 152 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 FOXRED2Q8IWF2 684 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.74□□□□□ -0.53
THBS3-202ENST00000428962 ARL11Q969Q4 196 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 ZNF552Q9H707 407 aaPredicted RBP11.74□□□□□ -0.53
THBS3-202ENST00000428962 PLEKHA2Q9HB19 425 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 Q9N2K0 584 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 DMXL1Q9Y485 3027 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 H7C1Q1 480 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 TM4SF5O14894 197 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 NAPSAO96009 420 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 MRPL49Q13405 166 aaKnown RBP11.74□□□□□ -0.53
THBS3-202ENST00000428962 IL13RA2Q14627 380 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 PIP4P1Q86T03 277 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 NEK7Q8TDX7 302 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 TMED6Q8WW62 240 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 GTF3AQ92664 365 aaKnown RBP11.74□□□□□ -0.53
THBS3-202ENST00000428962 C18orf12Q96KH6 178 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 PKIBQ9C010 78 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 RHOFQ9HBH0 211 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 MTCH1Q9NZJ7 389 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 CRIM1Q9NZV1 1036 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 ARHGAP21Q5T5U3 1957 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 DCHS1Q96JQ0 3298 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 E5RGE8 158 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 SCGB1D2O95969 90 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 GAPDHP04406 335 aaKnown RBP11.73□□□□□ -0.53
THBS3-202ENST00000428962 GLAP06280 429 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 DUSP1P28562 367 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 WNT5AP41221 380 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 TNFSF10P50591 281 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 TGFBR3Q03167 851 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 IL24Q13007 206 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 HAGHLQ6PII5 290 aaPredicted RBP11.73□□□□□ -0.53
THBS3-202ENST00000428962 Q6ZPA2 131 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 MDP1Q86V88 176 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 BATF2Q8N1L9 274 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 OR1S2Q8NGQ3 325 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 NSG2Q9Y328 171 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 TMED3Q9Y3Q3 217 aa11.73□□□□□ -0.53
THBS3-202ENST00000428962 LSM5Q9Y4Y9 91 aaKnown RBP11.73□□□□□ -0.53
THBS3-202ENST00000428962 CDRT15L2A8MXV6 281 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 BET1O15155 118 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 PHF1O43189 567 aaPredicted RBP11.72□□□□□ -0.53
THBS3-202ENST00000428962 JTBO76095 146 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 PRKACAP17612 351 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 RND3P61587 244 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 SP6Q3SY56 376 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 RNFT1Q5M7Z0 435 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 ZNF565Q8N9K5 539 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 BPIFCQ8NFQ6 507 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 MSI2Q96DH6 328 aaKnown RBP11.72□□□□□ -0.53
THBS3-202ENST00000428962 SAT2Q96F10 170 aaPredicted RBP11.72□□□□□ -0.53
THBS3-202ENST00000428962 TAF9BQ9HBM6 251 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 OR2S2Q9NQN1 319 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 ZNF629Q9UEG4 869 aaPredicted RBP11.72□□□□□ -0.53
THBS3-202ENST00000428962 LHX6Q9UPM6 363 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 TRDCB7Z8K6 153 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 ZNF205O95201 554 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 TAGLNQ01995 201 aaKnown RBP11.72□□□□□ -0.53
THBS3-202ENST00000428962 IGSF11Q5DX21 431 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 IL34Q6ZMJ4 242 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 NARS2Q96I59 477 aaKnown RBP11.72□□□□□ -0.53
THBS3-202ENST00000428962 RTL8AQ9BWD3 113 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 MMP26Q9NRE1 261 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 LPAR3Q9UBY5 353 aa11.72□□□□□ -0.53
THBS3-202ENST00000428962 WDFY3Q8IZQ1 3526 aa11.71□□□□□ -0.53
THBS3-202ENST00000428962 TRBV6-6A0A0A6YYG2 114 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 C3orf85A0A1B0GTC6 90 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 MED19A0JLT2 244 aaPredicted RBP11.71□□□□□ -0.54
THBS3-202ENST00000428962 ZNF705EA8MWA4 302 aaPredicted RBP11.71□□□□□ -0.54
THBS3-202ENST00000428962 J3QT63 122 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 MPPED1O15442 326 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 SYNGR1O43759 233 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 IGHG3P01860 377 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 APOC3P02656 99 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 FTH1P19P0C7X4 201 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 UBE2NP61088 152 aaKnown RBP11.71□□□□□ -0.54
THBS3-202ENST00000428962 FBXW12Q6X9E4 464 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 LYZL2Q7Z4W2 148 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 FAM58AQ8N1B3 248 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 OR11L1Q8NGX0 322 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 GLYATL2Q8WU03 294 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 IFT22Q9H7X7 185 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 CDH20Q9HBT6 801 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 COQ3Q9NZJ6 369 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 ATP23Q9Y6H3 246 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 FREM1Q5H8C1 2179 aa11.71□□□□□ -0.54
THBS3-202ENST00000428962 MED13Q9UHV7 2174 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 PIGBOS1A0A0B4J2F0 54 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 GPR31O00270 319 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 ZNHIT1O43257 154 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 MBPP02686 304 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms