RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 OPN4Q9UHM6 478 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.02□□□□□ -0.495e-9■■■■■ 37
SGCE-204ENST00000428696 A0A1W2PPH5 198 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 SHISA3A0PJX4 238 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 SLC33A1O00400 549 aaPredicted RBP12.02□□□□□ -0.49
SGCE-204ENST00000428696 SLC17A2O00624 439 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 SLC22A1O15245 554 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 ZNF737O75373 536 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 UBBP0CG47 229 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 FGF9P31371 208 aaPredicted RBP12.02□□□□□ -0.49
SGCE-204ENST00000428696 SDC2P34741 201 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 OR3A1P47881 315 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 C1orf229Q6ZS94 237 aaPredicted RBP12.02□□□□□ -0.49
SGCE-204ENST00000428696 LYPD6Q86Y78 171 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 CHST4Q8NCG5 386 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 OR51D1Q8NGF3 324 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 C22orf15Q8WYQ4 148 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 YIPF6Q96EC8 236 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 WDFY2Q96P53 400 aa12.02□□□□□ -0.49
SGCE-204ENST00000428696 SETD2Q9BYW2 2564 aaPredicted RBP12.01□□□□□ -0.49
SGCE-204ENST00000428696 WNK2Q9Y3S1 2297 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 TRBV23-1A0A0A0MS06 115 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 MGST3O14880 152 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 CLEC2LP0C7M8 214 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 VSIG8P0DPA2 414 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 IL13RA2Q14627 380 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 C2orf76Q3KRA6 126 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 KRBOX4Q5JUW0 171 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 NKAPLQ5M9Q1 402 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 SUMF2Q8NBJ7 301 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 LY6G5BQ8NDX9 201 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 KCNG3Q8TAE7 436 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 MRPS24Q96EL2 167 aaKnown RBP12.01□□□□□ -0.49
SGCE-204ENST00000428696 DPCDQ9BVM2 203 aaPredicted RBP12.01□□□□□ -0.49
SGCE-204ENST00000428696 FUNDC2Q9BWH2 189 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 TMEM160Q9NX00 188 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 STEAP1Q9UHE8 339 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 PEX16Q9Y5Y5 336 aa12.01□□□□□ -0.49
SGCE-204ENST00000428696 TRAV24A0A0B4J272 114 aa12□□□□□ -0.49
SGCE-204ENST00000428696 A0A1W2PRD5 423 aa12□□□□□ -0.49
SGCE-204ENST00000428696 A0A1W2PRF3 423 aa12□□□□□ -0.49
SGCE-204ENST00000428696 A0A1W2PRM7 423 aa12□□□□□ -0.49
SGCE-204ENST00000428696 hADV38S2A0JD32 116 aa12□□□□□ -0.49
SGCE-204ENST00000428696 FUOMA2VDF0 154 aa12□□□□□ -0.49
SGCE-204ENST00000428696 TRIM64CA6NLI5 447 aa12□□□□□ -0.49
SGCE-204ENST00000428696 IFITM5A6NNB3 132 aa12□□□□□ -0.49
SGCE-204ENST00000428696 MCRIP1C9JLW8 97 aa12□□□□□ -0.49
SGCE-204ENST00000428696 BPNT1O95861 308 aa12□□□□□ -0.49
SGCE-204ENST00000428696 SLC2A2P11168 524 aaPredicted RBP12□□□□□ -0.49
SGCE-204ENST00000428696 CCL3L1P16619 93 aa12□□□□□ -0.49
SGCE-204ENST00000428696 LMO1P25800 156 aa12□□□□□ -0.49
SGCE-204ENST00000428696 TGFBR1P36897 503 aa12□□□□□ -0.49
SGCE-204ENST00000428696 GLIPR1P48060 266 aa12□□□□□ -0.49
SGCE-204ENST00000428696 DLX1P56177 255 aa12□□□□□ -0.49
SGCE-204ENST00000428696 C11orf91Q3C1V1 193 aa12□□□□□ -0.49
SGCE-204ENST00000428696 RAB12Q6IQ22 244 aa12□□□□□ -0.49
SGCE-204ENST00000428696 VMO1Q7Z5L0 202 aa12□□□□□ -0.49
SGCE-204ENST00000428696 TEX29Q8N6K0 151 aa12□□□□□ -0.49
SGCE-204ENST00000428696 Q8NFD4 153 aa12□□□□□ -0.49
SGCE-204ENST00000428696 LHX4Q969G2 390 aa12□□□□□ -0.49
SGCE-204ENST00000428696 FAM3DQ96BQ1 224 aa12□□□□□ -0.49
SGCE-204ENST00000428696 TMEM59Q9BXS4 323 aa12□□□□□ -0.49
SGCE-204ENST00000428696 BARHL1Q9BZE3 327 aa12□□□□□ -0.49
SGCE-204ENST00000428696 SEBOXQ9HB31 216 aaPredicted RBP12□□□□□ -0.49
SGCE-204ENST00000428696 SIRT7Q9NRC8 400 aa12□□□□□ -0.49
SGCE-204ENST00000428696 DAPK2Q9UIK4 370 aa12□□□□□ -0.49
SGCE-204ENST00000428696 SVEP1Q4LDE5 3571 aa12□□□□□ -0.49
SGCE-204ENST00000428696 MEIKINA0A087WXM9 373 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 A0A0B4J203 849 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 hCG_1809904A0A1W2PP81 198 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 A0A1W2PPE2 198 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 A0A1W2PR64 198 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 A0A1W2PRV1 198 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 UBE2QL1A1L167 161 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 P2RX3P56373 397 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 ERVFRD-1P60508 538 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 MPV17LQ2QL34 196 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 GPR107Q5VW38 600 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 GPR141Q7Z602 305 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 TPRA1Q86W33 373 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 SLC25A28Q96A46 364 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 C1orf147Q96MC9 270 aaPredicted RBP11.99□□□□□ -0.49
SGCE-204ENST00000428696 NEDD4LQ96PU5 975 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 MS4A7Q9GZW8 240 aaPredicted RBP11.99□□□□□ -0.49
SGCE-204ENST00000428696 DOCK11Q5JSL3 2073 aa11.99□□□□□ -0.49
SGCE-204ENST00000428696 NSD1Q96L73 2696 aaPredicted RBP11.98□□□□□ -0.49
SGCE-204ENST00000428696 TRGV10A0A0A0MS01 117 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 TRAV40A0A0B4J280 105 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 NOTOA8MTQ0 251 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 IGHV4-38-2P0DP08 117 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 RANBP1P43487 201 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 ZNF273Q14593 569 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 NHLRC3Q5JS37 347 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 IDNKQ5T6J7 187 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 GPR157Q5UAW9 335 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 GDPGP1Q6ZNW5 385 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 LINC00596Q86U02 117 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 OR13F1Q8NGS4 319 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 C8orf46Q8TAG6 207 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 CCDC107Q8WV48 283 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms