RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 GLCCI1Q86VQ1 547 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 NR2C2APQ86WQ0 139 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 OSR2Q8N2R0 312 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 OR4S1Q8NGB4 309 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 OR13F1Q8NGS4 319 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 C8orf46Q8TAG6 207 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 TBC1D15Q8TC07 691 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 ST8SIA4Q92187 359 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 SNX22Q96L94 193 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 CHCHD6Q9BRQ6 235 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 DCTN5Q9BTE1 182 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 CENPOQ9BU64 300 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 MRPS26Q9BYN8 205 aaKnown RBP6.12□□□□□ -1.43
LINC01049-201ENST00000426840 FAM192AQ9GZU8 254 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 SHARPINQ9H0F6 387 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 ELL3Q9HB65 397 aaPredicted RBP6.12□□□□□ -1.43
LINC01049-201ENST00000426840 VCX3AQ9NNX9 186 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 TMEM160Q9NX00 188 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 ZNF581Q9P0T4 197 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 GHRLQ9UBU3 117 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 SLC25A10Q9UBX3 287 aaPredicted RBP6.12□□□□□ -1.43
LINC01049-201ENST00000426840 OPN4Q9UHM6 478 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 ZANQ9Y493 2812 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 INSIG2Q9Y5U4 225 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 V9GY05 133 aa6.12□□□□□ -1.43
LINC01049-201ENST00000426840 TEP1Q99973 2627 aaKnown RBP6.12□□□□□ -1.43
LINC01049-201ENST00000426840 HIVEP2P31629 2446 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 IGHV2-70DA0A0C4DH43 119 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 INAFM1C9JVW0 142 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 SLC17A2O00624 439 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 PDCD5O14737 125 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 DEGS1O15121 323 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 ZNF780AO75290 641 aaPredicted RBP6.11□□□□□ -1.43
LINC01049-201ENST00000426840 OR2H2O95918 312 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 CSTBP04080 98 aaKnown RBP6.11□□□□□ -1.43
LINC01049-201ENST00000426840 CLEC2LP0C7M8 214 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 RAB3BP20337 219 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 SERPINA2P20848 420 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 GATA3P23771 443 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 HTR2CP28335 458 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 PSMD7P51665 324 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 BMXP51813 675 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 CAPZA1P52907 286 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 OR10A3P58181 314 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 SCN1BQ07699 218 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 GPR176Q14439 515 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 IL13RA2Q14627 380 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 CR1LQ2VPA4 569 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 PIGYQ3MUY2 71 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 SLC22A6Q4U2R8 563 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 DCAF12L2Q5VW00 463 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 FOXB2Q5VYV0 432 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 AWAT2Q6E213 333 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 OR10K2Q6IF99 312 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 FAHD2BQ6P2I3 314 aaPredicted RBP6.11□□□□□ -1.43
LINC01049-201ENST00000426840 METAP1DQ6UB28 335 aaPredicted RBP6.11□□□□□ -1.43
LINC01049-201ENST00000426840 FIP1L1Q6UN15 594 aaKnown RBP6.11□□□□□ -1.43
LINC01049-201ENST00000426840 TPRA1Q86W33 373 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 TMEM104Q8NE00 496 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 TMEM185AQ8NFB2 350 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 OR5D13Q8NGL4 314 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 OR6M1Q8NGM8 313 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 MRPS24Q96EL2 167 aaKnown RBP6.11□□□□□ -1.43
LINC01049-201ENST00000426840 FAHD2AQ96GK7 314 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 JMJD8Q96S16 334 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 S100A13Q99584 98 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 NUDT16L1Q9BRJ7 211 aaKnown RBP6.11□□□□□ -1.43
LINC01049-201ENST00000426840 FUNDC2Q9BWH2 189 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 FAM234AQ9H0X4 552 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 BANF2Q9H503 90 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 PCDHB16Q9NRJ7 776 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 OR5V1Q9UGF6 321 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 GLS2Q9UI32 602 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 RPUSD1Q9UJJ7 312 aaKnown RBP6.11□□□□□ -1.43
LINC01049-201ENST00000426840 KCNS2Q9ULS6 477 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 ST3GAL6Q9Y274 331 aa6.11□□□□□ -1.43
LINC01049-201ENST00000426840 SONP18583 2426 aaKnown RBP6.11□□□□□ -1.43
LINC01049-201ENST00000426840 FN1P02751 2386 aaKnown RBP6.11□□□□□ -1.43
LINC01049-201ENST00000426840 TRAV24A0A0B4J272 114 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 A0A0G2JMP0 313 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 LOC100506127A0A0U1RQW1 187 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 A0A0X1KG70 313 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 IFITM5A6NNB3 132 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 TMEM14DPA8MWL7 114 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 J3QLI3 93 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 SIRPB1O00241 398 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 SLC33A1O00400 549 aaPredicted RBP6.1□□□□□ -1.43
LINC01049-201ENST00000426840 MGST3O14880 152 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 GEMIN2O14893 280 aaKnown RBP6.1□□□□□ -1.43
LINC01049-201ENST00000426840 LDLRAD4O15165 306 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 AIREO43918 545 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 LIPFP07098 398 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 UBBP0CG47 229 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 PPIAL4GP0DN37 164 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 SLC2A2P11168 524 aaPredicted RBP6.1□□□□□ -1.43
LINC01049-201ENST00000426840 GTF2F2P13984 249 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 ZNF44P15621 663 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 MGMTP16455 207 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 NDUFB7P17568 137 aa6.1□□□□□ -1.43
LINC01049-201ENST00000426840 MYL9P24844 172 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms