RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 AGAP6Q5VW22 663 aa12.72□□□□□ -0.37
GINS3-203ENST00000426538 RSBN1Q5VWQ0 802 aaPredicted RBP12.72□□□□□ -0.37
GINS3-203ENST00000426538 OR51S1Q8NGJ8 323 aa12.72□□□□□ -0.37
GINS3-203ENST00000426538 OR56B4Q8NH76 319 aa12.72□□□□□ -0.37
GINS3-203ENST00000426538 SNAPC3Q92966 411 aa12.72□□□□□ -0.37
GINS3-203ENST00000426538 VRK1Q99986 396 aaPredicted RBP12.72□□□□□ -0.37
GINS3-203ENST00000426538 RIMS4Q9H426 269 aaPredicted RBP12.72□□□□□ -0.37
GINS3-203ENST00000426538 TREM2Q9NZC2 230 aa12.72□□□□□ -0.37
GINS3-203ENST00000426538 SCP2D1Q9UJQ7 156 aa12.72□□□□□ -0.37
GINS3-203ENST00000426538 NUBP2Q9Y5Y2 271 aa12.72□□□□□ -0.37
GINS3-203ENST00000426538 IFNL4K9M1U5 179 aa12.71□□□□□ -0.37
GINS3-203ENST00000426538 PMP2P02689 132 aa12.71□□□□□ -0.37
GINS3-203ENST00000426538 CSN2P05814 226 aa12.71□□□□□ -0.37
GINS3-203ENST00000426538 FCGR3AP08637 254 aa12.71□□□□□ -0.37
GINS3-203ENST00000426538 TAS2R46P59540 309 aa12.71□□□□□ -0.37
GINS3-203ENST00000426538 HOXA4Q00056 320 aaPredicted RBP12.71□□□□□ -0.37
GINS3-203ENST00000426538 OR5H2Q8NGV7 314 aa12.71□□□□□ -0.37
GINS3-203ENST00000426538 MAFIPQ8WZ33 124 aa12.71□□□□□ -0.37
GINS3-203ENST00000426538 CREB3L1Q96BA8 519 aa12.71□□□□□ -0.37
GINS3-203ENST00000426538 TINAGL1Q9GZM7 467 aaPredicted RBP12.71□□□□□ -0.37
GINS3-203ENST00000426538 WIPI2Q9Y4P8 454 aa12.71□□□□□ -0.37
GINS3-203ENST00000426538 KLF2Q9Y5W3 355 aaPredicted RBP12.71□□□□□ -0.37
GINS3-203ENST00000426538 ZNF462Q96JM2 2506 aa12.71□□□□□ -0.37
GINS3-203ENST00000426538 OR2AT4A6NND4 320 aa12.71□□□□□ -0.38
GINS3-203ENST00000426538 CYB5R3P00387 301 aaPredicted RBP12.71□□□□□ -0.38
GINS3-203ENST00000426538 EGR1P18146 543 aa12.71□□□□□ -0.38
GINS3-203ENST00000426538 LMO1P25800 156 aa12.71□□□□□ -0.38
GINS3-203ENST00000426538 MDH2P40926 338 aaKnown RBP12.71□□□□□ -0.38
GINS3-203ENST00000426538 CEBPDP49716 269 aaPredicted RBP12.71□□□□□ -0.38
GINS3-203ENST00000426538 ARPC4P59998 168 aa12.71□□□□□ -0.38
GINS3-203ENST00000426538 MICBQ29980 383 aa12.71□□□□□ -0.38
GINS3-203ENST00000426538 C1orf87Q8N0U7 546 aa12.71□□□□□ -0.38
GINS3-203ENST00000426538 OR5AP2Q8NGF4 316 aa12.71□□□□□ -0.38
GINS3-203ENST00000426538 OR5T2Q8NGG2 359 aa12.71□□□□□ -0.38
GINS3-203ENST00000426538 MARVELD1Q9BSK0 173 aa12.71□□□□□ -0.38
GINS3-203ENST00000426538 CBLN4Q9NTU7 201 aa12.71□□□□□ -0.38
GINS3-203ENST00000426538 NUDT15Q9NV35 164 aa12.71□□□□□ -0.38
GINS3-203ENST00000426538 TRAV6A0A075B6T7 132 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 A6NNC1 897 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 INMT-MINDY4F8WBC2 141 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 H7C1Q1 480 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 PSG2P11465 335 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 PRDX2P32119 198 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 RBMXP38159 391 aaKnown RBP12.7□□□□□ -0.38
GINS3-203ENST00000426538 GABRA2P47869 451 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 TSPAN5P62079 268 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 RBMS2Q15434 407 aaKnown RBP12.7□□□□□ -0.38
GINS3-203ENST00000426538 SCGB2B2Q4G0G5 96 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 BTN2A1Q7KYR7 527 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 CCL17Q92583 94 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 UPRTQ96BW1 309 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 PRRT1Q99946 306 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 ZNF286AQ9HBT8 521 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 TMEM165Q9HC07 324 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 ANXA10Q9UJ72 324 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 CACNA1DQ01668 2161 aa12.7□□□□□ -0.38
GINS3-203ENST00000426538 IGHV3OR15-7A0A075B7D8 119 aa12.69□□□□□ -0.38
GINS3-203ENST00000426538 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.69□□□□□ -0.38
GINS3-203ENST00000426538 NAPSAO96009 420 aa12.69□□□□□ -0.38
GINS3-203ENST00000426538 PPOXP50336 477 aa12.69□□□□□ -0.38
GINS3-203ENST00000426538 COL10A1Q03692 680 aa12.69□□□□□ -0.38
GINS3-203ENST00000426538 SHEQ5VZ18 495 aa12.69□□□□□ -0.38
GINS3-203ENST00000426538 IDO2Q6ZQW0 420 aa12.69□□□□□ -0.38
GINS3-203ENST00000426538 TMEM17Q86X19 198 aa12.69□□□□□ -0.38
GINS3-203ENST00000426538 SLC6A7Q99884 636 aa12.69□□□□□ -0.38
GINS3-203ENST00000426538 GINS4Q9BRT9 223 aa12.69□□□□□ -0.38
GINS3-203ENST00000426538 PPA2Q9H2U2 334 aa12.69□□□□□ -0.38
GINS3-203ENST00000426538 ABCA4P78363 2273 aa12.69□□□□□ -0.38
GINS3-203ENST00000426538 PKDREJQ9NTG1 2253 aa12.69□□□□□ -0.38
GINS3-203ENST00000426538 DYSFO75923 2080 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 NDUFB6O95139 128 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 DHFRP00374 187 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 H2AFB2P0C5Z0 115 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 RAB25P57735 213 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 SRSF7Q16629 238 aaKnown RBP eCLIP12.68□□□□□ -0.38
GINS3-203ENST00000426538 VAX1Q5SQQ9 334 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 FAM201AQ5SY85 155 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 ASCC1Q8N9N2 400 aaKnown RBP12.68□□□□□ -0.38
GINS3-203ENST00000426538 SLC25A21Q9BQT8 299 aaPredicted RBP12.68□□□□□ -0.38
GINS3-203ENST00000426538 RAB1BQ9H0U4 201 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 C20orf85Q9H1P6 137 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 SEBOXQ9HB31 216 aaPredicted RBP12.68□□□□□ -0.38
GINS3-203ENST00000426538 ING3Q9NXR8 418 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 IGHV1-69-2A0A0G2JMI3 117 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 PSPNO60542 156 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 ZNF205O95201 554 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 GOSR1O95249 250 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 ZNF735P0CB33 412 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 RNF224P0DH78 156 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 MUC1P15941 1255 aaPredicted RBP12.68□□□□□ -0.38
GINS3-203ENST00000426538 CD80P33681 288 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 KCNJ3P48549 501 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 BTG1P62324 171 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 CDK10Q15131 360 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 ZMYND11Q15326 602 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 GRK1Q15835 563 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 ARRDC1Q8N5I2 433 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 CD177Q8N6Q3 437 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 DEFB108BQ8NET1 73 aa12.68□□□□□ -0.38
GINS3-203ENST00000426538 PPP1R35Q8TAP8 253 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms