RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 OR2W3Q7Z3T1 314 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 ZNF329Q86UD4 541 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 CATSPERDQ86XM0 798 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 ADGRG5Q8IZF4 528 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OR8H3Q8N146 312 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 CPNE2Q96FN4 548 aaPredicted RBP9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 TBX5Q99593 518 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 HMG20AQ9NP66 347 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 RBFOX1Q9NWB1 397 aaKnown RBP9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 ZNF446Q9NWS9 450 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 ING3Q9NXR8 418 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 ODAMA1E959 279 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 NCBP2LA6PVI3 153 aaKnown RBP9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 F8VVB4 439 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 F8VWA3 439 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 H3BSH0 61 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 CCL24O00175 119 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 MAGEB3O15480 346 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 MAGEB4O15481 346 aaPredicted RBP9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 PRKYO43930 277 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 ENTPD6O75354 484 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OR2H2O95918 312 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 CSN2P05814 226 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OR3A1P47881 315 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 GLIPR1P48060 266 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 NPBWR2P48146 333 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 TMED1Q13445 227 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 FLOT2Q14254 428 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 PNLIPRP3Q17RR3 467 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 C8orf86Q6ZUL3 223 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 UTS2BQ765I0 119 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 TMEM179BQ7Z7N9 219 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OR10H4Q8NGA5 316 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OR8U1Q8NH10 309 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OPALINQ96PE5 141 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 ADGRL4Q9HBW9 690 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 FAM118AQ9NWS6 357 aa9.74□□□□□ -0.85
HLA-DQB3-203ENST00000425319 A0A087X0M5 115 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 KBTBD11-OT1A0A1B0GTJ5 212 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 A0A1B0GX30 115 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 AP4M1O00189 453 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 MPZL2O60487 215 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 FKBP6O75344 327 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 MMP23AO75900 390 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 GAPDHP04406 335 aaKnown RBP9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 SNRNP70P08621 437 aaKnown RBP9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 TMEM225BP0DP42 221 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 CALCBP10092 127 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 TCF23Q7RTU1 214 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 SAXO1Q8IYX7 474 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 HS3ST5Q8IZT8 346 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 Q8NFD4 153 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OR10A7Q8NGE5 316 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OR10X1Q8NGY0 326 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 FGGYQ96C11 551 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 IL4I1Q96RQ9 567 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 ZNF286AQ9HBT8 521 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 GNG8Q9UK08 70 aa9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 PRKDCP78527 4128 aaKnown RBP9.73□□□□□ -0.85
HLA-DQB3-203ENST00000425319 IGKV1-27A0A075B6S5 117 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 MEIKINA0A087WXM9 373 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 A0A1W2PQL4 384 aaPredicted RBP9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 FAM172BPA6NC97 362 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 SH2D7A6NKC9 451 aaPredicted RBP9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 SNTNA6NMZ2 147 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 G3V2T6 193 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 H0YHG0 523 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 J3QR06 171 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 GYG2O15488 501 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 GZMHP20718 246 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 IL3RAP26951 378 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 ECI1P42126 302 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 HNF4GQ14541 408 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 DNAL1Q4LDG9 190 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 AADACL4Q5VUY2 407 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 C10orf99Q6UWK7 81 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 MOB3BQ86TA1 216 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 ZDHHC13Q8IUH4 622 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OR5D14Q8NGL3 314 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OR56B4Q8NH76 319 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 RASL11BQ9BPW5 248 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 COMMD4Q9H0A8 199 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 NCOR1P1Q9H4R4 102 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 PALMDQ9NP74 551 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 RAB9BQ9NP90 201 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 IDI2-AS1Q9NZ38 188 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 NOTCH3Q9UM47 2321 aa9.72□□□□□ -0.85
HLA-DQB3-203ENST00000425319 LOC107986453A0A1B0GWG9 222 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FAM90A18PA6NE21 464 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FAM90A16PA6NEW6 464 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FAM90A20PA6NIJ5 464 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FAM90A9PA6NNJ1 464 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FAM90A12PA8MX19 464 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FAM90A5PA8MXJ8 464 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 PRR32B1ATL7 298 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 LY6LH3BQJ8 138 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 KDM4BO94953 1096 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 LY86O95711 162 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 IGHG2P01859 326 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 AMY1AP04745 511 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms