RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 TPRKBQ9Y3C4 175 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 TMEM82A0PJX8 343 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 K7N7A8 449 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 GABRPO00591 440 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 SH2D1BO14796 132 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 MYF6P23409 242 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 COX7A1P24310 79 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 ZNF273Q14593 569 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 MED22Q15528 200 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 BEAN1Q3B7T3 259 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 Q499Y3 187 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 NCR3LG1Q68D85 454 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 TMEM200BQ69YZ2 307 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 ZNF782Q6ZMW2 699 aaPredicted RBP10.51□□□□□ -0.73
VRK3-203ENST00000424804 TRAPPC6BQ86SZ2 158 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 DYNAPQ8N1N2 210 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 NANOGP1Q8N7R0 232 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 RPS4Y2Q8TD47 263 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 SNX22Q96L94 193 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 OR14A2Q96R54 314 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 S100A13Q99584 98 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 SSX3Q99909 188 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 MND1Q9BWT6 205 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 FAM234AQ9H0X4 552 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 CKLFQ9UBR5 152 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 ING4Q9UNL4 249 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 FOXJ3Q9UPW0 622 aa10.51□□□□□ -0.73
VRK3-203ENST00000424804 FAM90A8PA6NJQ4 464 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 G3V4G9 280 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 HSPB6O14558 160 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 CHST1O43916 411 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 KDM4BO94953 1096 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 HTR3BO95264 441 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 PAHP00439 452 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 MAS1P04201 325 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 BDKRB2P30411 391 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 ZNF93P35789 620 aaPredicted RBP10.5□□□□□ -0.73
VRK3-203ENST00000424804 OR3A4PP47883 348 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 HSPA13P48723 471 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 DLX6P56179 175 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 ZP1P60852 638 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 RIPK1Q13546 671 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 HERPUD1Q15011 391 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 RSU1Q15404 277 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 YIF1BQ5BJH7 314 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 SPIN3Q5JUX0 258 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 LDLRAD2Q5SZI1 272 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 KPRPQ5T749 579 aaPredicted RBP10.5□□□□□ -0.73
VRK3-203ENST00000424804 OR8H2Q8N162 312 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 ZNF485Q8NCK3 441 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 OR4S1Q8NGB4 309 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 OR5D13Q8NGL4 314 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 WIPF2Q8TF74 440 aaPredicted RBP10.5□□□□□ -0.73
VRK3-203ENST00000424804 PGLYRP3Q96LB9 341 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 TMED9Q9BVK6 235 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 ANKRD60Q9BZ19 345 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 FKBP14Q9NWM8 211 aa10.5□□□□□ -0.73
VRK3-203ENST00000424804 PAK1IP1Q9NWT1 392 aaPredicted RBP10.5□□□□□ -0.73
VRK3-203ENST00000424804 SF3B6Q9Y3B4 125 aaKnown RBP10.5□□□□□ -0.73
VRK3-203ENST00000424804 TRBV5-5A0A0J9YX44 114 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 hCG_1809904A0A1W2PP81 198 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 A0A1W2PPE2 198 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 A0A1W2PR64 198 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 A0A1W2PRV1 198 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 DEGS1O15121 323 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 RGS10O43665 173 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 PSPNO60542 156 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 ZNF737O75373 536 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 ALX3O95076 343 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 CDRT1O95170 752 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 OR2H2O95918 312 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 HSMCR30P0CW71 290 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 GABRA5P31644 462 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 VHLP40337 213 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 DOC2BQ14184 412 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 ZNF146Q15072 292 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 LY6EQ16553 131 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 AANATQ16613 207 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 SAMD5Q5TGI4 173 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 CCBE1Q6UXH8 406 aaPredicted RBP10.49□□□□□ -0.73
VRK3-203ENST00000424804 SAXO1Q8IYX7 474 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 JAGN1Q8N5M9 183 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 OR5M11Q96RB7 305 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 ZNF184Q99676 751 aaPredicted RBP10.49□□□□□ -0.73
VRK3-203ENST00000424804 TMEM138Q9NPI0 162 aa10.49□□□□□ -0.73
VRK3-203ENST00000424804 TRAV8-7A0A075B6U6 113 aa10.48□□□□□ -0.73
VRK3-203ENST00000424804 hADV38S2A0JD32 116 aa10.48□□□□□ -0.73
VRK3-203ENST00000424804 MAGEA13PA6NCF6 341 aa10.48□□□□□ -0.73
VRK3-203ENST00000424804 BTBD17A6NE02 478 aa10.48□□□□□ -0.73
VRK3-203ENST00000424804 CSTBP04080 98 aaKnown RBP10.48□□□□□ -0.73
VRK3-203ENST00000424804 CSF1P09603 554 aa10.48□□□□□ -0.73
VRK3-203ENST00000424804 SERPINA2P20848 420 aa10.48□□□□□ -0.73
VRK3-203ENST00000424804 OR3A1P47881 315 aa10.48□□□□□ -0.73
VRK3-203ENST00000424804 MTNR1BP49286 362 aa10.48□□□□□ -0.73
VRK3-203ENST00000424804 BMXP51813 675 aa10.48□□□□□ -0.73
VRK3-203ENST00000424804 RPS11P62280 158 aaKnown RBP eCLIP10.48□□□□□ -0.73
VRK3-203ENST00000424804 AESQ08117 197 aa10.48□□□□□ -0.73
VRK3-203ENST00000424804 ATXN7L3Q14CW9 347 aaPredicted RBP10.48□□□□□ -0.73
VRK3-203ENST00000424804 SPHARQ15513 63 aa10.48□□□□□ -0.73
VRK3-203ENST00000424804 C2orf68Q2NKX9 166 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms