RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CDX2Q99626 313 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 KIR2DL4Q99706 377 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 RNF126Q9BV68 326 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 MAP1LC3BQ9GZQ8 125 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 CHST5Q9GZS9 411 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 SLIRPQ9GZT3 109 aaKnown RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 IL25Q9H293 177 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 ZSCAN16Q9H4T2 348 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 GNB4Q9HAV0 340 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 HES4Q9HCC6 221 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 TRMT112Q9UI30 125 aaKnown RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 GLS2Q9UI32 602 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 JPT1Q9UK76 154 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 ASB4Q9Y574 426 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 SOGA1O94964 1423 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 SCN5AQ14524 2016 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 SAA2-SAA4A0A096LPE2 208 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 IGLV1-36A0A0B4J1U3 117 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 A0A0G2JRQ6 117 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 A0A1B0GV90 55 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 BTNL10A8MVZ5 291 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 EEF1E1-BLOC1S5C9J1V9 151 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 E7EQ34 232 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 C16orf97H3BN30 126 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 H7C417 338 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 FAAHO00519 579 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 EEF1E1O43324 174 aaKnown RBP2.89□□□□□ -1.95
SF3B1-205ENST00000424674 EDIL3O43854 480 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 TPST1O60507 370 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 CCDC22O60826 627 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 SERPINB7O75635 380 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 OR2J2O76002 312 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 GADD45GO95257 159 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 OR4A8P0C604 315 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 CD1EP15812 388 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 IGLL1P15814 213 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 GPX2P18283 190 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 IGHV1-2P23083 117 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 VDAC2P45880 294 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-205ENST00000424674 CSRP3P50461 194 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 TPI1P60174 286 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 RPS23P62266 143 aaKnown RBP2.89□□□□□ -1.95
SF3B1-205ENST00000424674 FKBP3Q00688 224 aaKnown RBP2.89□□□□□ -1.95
SF3B1-205ENST00000424674 DEFA6Q01524 100 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 INCA1Q0VD86 236 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 C1DQ13901 141 aaKnown RBP2.89□□□□□ -1.95
SF3B1-205ENST00000424674 SLC10A1Q14973 349 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 C17orf58Q2M2W7 97 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF718Q3SXZ3 478 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 TCTEX1D4Q5JR98 221 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 C1orf100Q5SVJ3 147 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-205ENST00000424674 FBXL22Q6P050 247 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 CLEC19AQ6UXS0 136 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 SCGB1D4Q6XE38 83 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF620Q6ZNG0 422 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 TRPT1Q86TN4 253 aaKnown RBP2.89□□□□□ -1.95
SF3B1-205ENST00000424674 TGIF2LYQ8IUE0 185 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 C6orf223Q8N319 242 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF614Q8N883 585 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 C4orf32Q8N8J7 132 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 OR9G1Q8NH87 305 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 TAF15Q92804 592 aaKnown RBP eCLIP2.89□□□□□ -1.95
SF3B1-205ENST00000424674 TMEM203Q969S6 136 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF501Q96CX3 271 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-205ENST00000424674 GMPPAQ96IJ6 420 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-205ENST00000424674 SLC35G5Q96KT7 338 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 EBF4Q9BQW3 602 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 TMEM70Q9BUB7 260 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 SH3BGRL3Q9H299 93 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 ZDHHC11Q9H8X9 412 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 WFDC1Q9HC57 220 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 RRAGDQ9NQL2 400 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-205ENST00000424674 MTFP1Q9UDX5 166 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 YTHDF2Q9Y5A9 579 aaKnown RBP2.89□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF780BQ9Y6R6 833 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 CACNA1FO60840 1977 aa2.89□□□□□ -1.95
SF3B1-205ENST00000424674 RTL9Q8NET4 1388 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 IGHV1OR15-1A0A075B7D0 117 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 TRAV9-2A0A087WT02 112 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 C5orf49A4QMS7 147 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 FAM183AA6NL82 134 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 H0Y9J4 135 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 K7EPK0 472 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 COPEO14579 308 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 NDUFS5O43920 106 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 PDCD6O75340 191 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 GCM2O75603 506 aaPredicted RBP2.88□□□□□ -1.95
SF3B1-205ENST00000424674 ZFAND5O76080 213 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 OR2A4O95047 310 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 IFNGP01579 166 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 APOA2P02652 100 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 REG1AP05451 166 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 CSF3P09919 207 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF708P17019 499 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 FMO3P31513 532 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 PHBP35232 272 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 DRD3P35462 400 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 CTRLP40313 264 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms