RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 LSM4Q9Y4Z0 139 aaKnown RBP10.15□□□□□ -0.78
LINC00339-203ENST00000420503 PCDHGB5Q9Y5G0 923 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 HSPE1-MOB4S4R3N1 261 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 BIRC6Q9NR09 4857 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 TRGV10A0A0A0MS01 117 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 TRAV39A0A0B4J263 110 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 A0A1W2PPE3 182 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 ODAMA1E959 279 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 HSPB6O14558 160 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 FCGR1AP12314 374 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 FASP25445 335 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 CD34P28906 385 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 ERP29P30040 261 aaKnown RBP10.14□□□□□ -0.79
LINC00339-203ENST00000420503 SCN1BQ07699 218 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 LTC4SQ16873 150 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 TP53I3Q53FA7 332 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 FAM53AQ6NSI3 398 aaPredicted RBP10.14□□□□□ -0.79
LINC00339-203ENST00000420503 Q6P435 159 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 ZBTB49Q6ZSB9 765 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 C5orf56Q8N8D9 126 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 TMEM163Q8TC26 289 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 KIRREL1Q96J84 757 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 ZNF581Q9P0T4 197 aa10.14□□□□□ -0.79
LINC00339-203ENST00000420503 FAM90A18PA6NE21 464 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 FAM90A16PA6NEW6 464 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 FAM90A20PA6NIJ5 464 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 FAM90A9PA6NNJ1 464 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 FAM90A12PA8MX19 464 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 FAM90A5PA8MXJ8 464 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 GATBO75879 557 aaKnown RBP10.13□□□□□ -0.79
LINC00339-203ENST00000420503 RPLP1P05386 114 aaKnown RBP10.13□□□□□ -0.79
LINC00339-203ENST00000420503 KRT8P05787 483 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 FAM90A15PP0C7V4 464 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 FAM90A13PP0C7W8 464 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 FAM90A14PP0C7W9 464 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 FAM90A24PP0C7X0 464 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 POLR2IP36954 125 aaKnown RBP10.13□□□□□ -0.79
LINC00339-203ENST00000420503 PTGFRP43088 359 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 MTCP1P56278 107 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 DGCR2P98153 550 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 NXNL2Q5VZ03 156 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 C12orf73Q69YU5 71 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 ZFP1Q6P2D0 407 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 AMIGO2Q86SJ2 522 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 RTN4RL2Q86UN3 420 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 OR10H4Q8NGA5 316 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 OR51D1Q8NGF3 324 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 OR51A4Q8NGJ6 313 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 OR13A1Q8NGR1 328 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 CORO2AQ92828 525 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 GAL3ST2Q9H3Q3 398 aa10.13□□□□□ -0.79
LINC00339-203ENST00000420503 EXOSC4Q9NPD3 245 aaKnown RBP10.13□□□□□ -0.79
LINC00339-203ENST00000420503 A0A087X0M5 115 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 IGHV3-72A0A0B4J1Y9 119 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 A0A1B0GX30 115 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 METTL15A6NJ78 407 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 ZAR1LA6NP61 321 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 SERPINE3A8MV23 424 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 SLC33A1O00400 549 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-203ENST00000420503 TOR1AO14656 332 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 ZNF44P15621 663 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 ATF1P18846 271 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 MYCNOSP40205 109 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 RBP2P50120 134 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 GNG10P50151 68 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 NANOS3P60323 173 aaKnown RBP10.12□□□□□ -0.79
LINC00339-203ENST00000420503 ZNF85Q03923 595 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 PDZK1IP1Q13113 114 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 CDK5R1Q15078 307 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 KRBOX4Q5JUW0 171 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 ENTHD1Q8IYW4 607 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 TOMM40LQ969M1 308 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 RPEQ96AT9 228 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 FGGYQ96C11 551 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 CENPNQ96H22 339 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-203ENST00000420503 GABARAPL1Q9H0R8 117 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 SEBOXQ9HB31 216 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-203ENST00000420503 SORL1Q92673 2214 aa10.12□□□□□ -0.79
LINC00339-203ENST00000420503 ANKRD65E5RJM6 399 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 G3V2T6 193 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 CCL24O00175 119 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 KDM4BO94953 1096 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 IGKV1D-33P01593 117 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 IGKV1-33P01594 117 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 CGB3P0DN86 165 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 CGB7P0DN87 165 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 TMEM11P17152 192 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 GLP1RP43220 463 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 REG1BP48304 166 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 ATP1B3P54709 279 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 ISL1P61371 349 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 HES1Q14469 280 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 SPIN3Q5JUX0 258 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 KDM4DQ6B0I6 523 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 OR52W1Q6IF63 320 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 ZNF695Q8IW36 515 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 Q8IYB0 196 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 C10orf67Q8IYJ2 551 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 OR13C9Q8NGT0 318 aa10.11□□□□□ -0.79
LINC00339-203ENST00000420503 RFESDQ8TAC1 157 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms